Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0592 and Echvi_0593 are separated by 91 nucleotides Echvi_0593 and Echvi_0594 are separated by 41 nucleotides Echvi_0594 and Echvi_0595 are separated by 33 nucleotides
Echvi_0592: Echvi_0592 - Obg family GTPase CgtA, at 669,913 to 670,905
_0592
Echvi_0593: Echvi_0593 - Adenylate kinase and related kinases, at 670,997 to 671,569
_0593
Echvi_0594: Echvi_0594 - hypoxanthine phosphoribosyltransferase, at 671,611 to 672,192
_0594
Echvi_0595: Echvi_0595 - Cellulase M and related proteins, at 672,226 to 673,143
_0595
Position (kb) 670
671
672 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 670.909 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.912 kb on - strand at 670.912 kb on - strand at 670.919 kb on - strand at 670.932 kb on - strand at 670.981 kb on - strand at 670.999 kb on - strand at 671.001 kb on + strand at 671.586 kb on - strand at 671.599 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.709 kb on - strand, within Echvi_0594 at 671.732 kb on - strand, within Echvi_0594 at 671.843 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.854 kb on - strand, within Echvi_0594 at 671.854 kb on - strand, within Echvi_0594 at 671.941 kb on - strand, within Echvi_0594 at 672.042 kb on - strand, within Echvi_0594 at 672.105 kb on - strand, within Echvi_0594 at 672.105 kb on - strand, within Echvi_0594 at 672.142 kb on - strand at 672.180 kb on - strand at 672.184 kb on - strand at 672.223 kb on + strand at 672.227 kb on + strand at 672.229 kb on + strand at 672.245 kb on + strand at 672.245 kb on + strand at 672.251 kb on + strand at 672.252 kb on - strand at 672.252 kb on - strand at 672.253 kb on + strand at 672.303 kb on + strand at 672.303 kb on + strand at 672.304 kb on - strand at 672.331 kb on - strand, within Echvi_0595 at 672.350 kb on + strand, within Echvi_0595 at 672.350 kb on + strand, within Echvi_0595 at 672.351 kb on - strand, within Echvi_0595 at 672.397 kb on + strand, within Echvi_0595 at 672.398 kb on - strand, within Echvi_0595 at 672.471 kb on + strand, within Echvi_0595 at 672.534 kb on + strand, within Echvi_0595 at 672.534 kb on + strand, within Echvi_0595 at 672.535 kb on - strand, within Echvi_0595
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 670,909 - +0.7 670,909 - -1.2 670,909 - +0.2 670,909 - -1.8 670,912 - +2.2 670,912 - -0.7 670,919 - -3.2 670,932 - -1.5 670,981 - +1.4 670,999 - -1.0 671,001 + -0.5 671,586 - -0.0 671,599 - -0.6 671,625 - +0.3 671,625 - +1.5 671,625 - +0.9 671,625 - -0.4 671,625 - +0.2 671,625 - -0.3 671,627 - -0.7 671,627 - +0.1 671,627 - +0.7 671,627 - +0.1 671,627 - -0.5 671,709 - Echvi_0594 0.17 +0.4 671,732 - Echvi_0594 0.21 -0.3 671,843 - Echvi_0594 0.40 -1.3 671,849 - Echvi_0594 0.41 +0.8 671,849 - Echvi_0594 0.41 -0.9 671,849 - Echvi_0594 0.41 -0.5 671,854 - Echvi_0594 0.42 +0.4 671,854 - Echvi_0594 0.42 -1.2 671,941 - Echvi_0594 0.57 +0.1 672,042 - Echvi_0594 0.74 +0.2 672,105 - Echvi_0594 0.85 -0.3 672,105 - Echvi_0594 0.85 +1.1 672,142 - +1.5 672,180 - +0.7 672,184 - +0.3 672,223 + -1.2 672,227 + +0.0 672,229 + -2.0 672,245 + +0.5 672,245 + -0.3 672,251 + +0.3 672,252 - -1.6 672,252 - +0.1 672,253 + -0.8 672,303 + +0.2 672,303 + +0.2 672,304 - -0.7 672,331 - Echvi_0595 0.11 -0.5 672,350 + Echvi_0595 0.14 +0.6 672,350 + Echvi_0595 0.14 -3.0 672,351 - Echvi_0595 0.14 -1.5 672,397 + Echvi_0595 0.19 +0.2 672,398 - Echvi_0595 0.19 -0.8 672,471 + Echvi_0595 0.27 -0.5 672,534 + Echvi_0595 0.34 -0.3 672,534 + Echvi_0595 0.34 -0.6 672,535 - Echvi_0595 0.34 -0.9
Or see this region's nucleotide sequence