Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4274 and EX28DRAFT_4275 are separated by 44 nucleotides EX28DRAFT_4275 and EX28DRAFT_4276 are separated by 123 nucleotides EX28DRAFT_4276 and EX28DRAFT_4277 are separated by 41 nucleotides EX28DRAFT_4277 and EX28DRAFT_4278 are separated by 149 nucleotides EX28DRAFT_4278 and EX28DRAFT_4279 are separated by 88 nucleotides
EX28DRAFT_4274: EX28DRAFT_4274 - transcriptional regulator, LacI family, at 79,125 to 80,177
_4274
EX28DRAFT_4275: EX28DRAFT_4275 - Pirin-related protein, at 80,222 to 80,917
_4275
EX28DRAFT_4276: EX28DRAFT_4276 - Predicted dehydrogenases and related proteins, at 81,041 to 82,078
_4276
EX28DRAFT_4277: EX28DRAFT_4277 - RNA, at 82,120 to 82,185
_4277
EX28DRAFT_4278: EX28DRAFT_4278 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 82,335 to 82,823
_4278
EX28DRAFT_4279: EX28DRAFT_4279 - gamma-glutamyltranspeptidase, at 82,912 to 84,657
_4279
Position (kb) 81
82
83 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 80.044 kb on - strand, within EX28DRAFT_4274 at 80.209 kb on + strand at 80.210 kb on - strand at 80.224 kb on - strand at 80.574 kb on + strand, within EX28DRAFT_4275 at 80.607 kb on + strand, within EX28DRAFT_4275 at 80.642 kb on - strand, within EX28DRAFT_4275 at 80.642 kb on - strand, within EX28DRAFT_4275 at 80.718 kb on + strand, within EX28DRAFT_4275 at 80.718 kb on + strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.719 kb on - strand, within EX28DRAFT_4275 at 80.829 kb on + strand, within EX28DRAFT_4275 at 80.829 kb on + strand, within EX28DRAFT_4275 at 80.830 kb on - strand, within EX28DRAFT_4275 at 80.906 kb on + strand at 80.910 kb on + strand at 80.910 kb on + strand at 80.910 kb on + strand at 80.911 kb on - strand at 80.911 kb on - strand at 80.911 kb on - strand at 80.949 kb on - strand at 80.977 kb on + strand at 81.174 kb on + strand, within EX28DRAFT_4276 at 81.175 kb on - strand, within EX28DRAFT_4276 at 81.239 kb on + strand, within EX28DRAFT_4276 at 81.239 kb on + strand, within EX28DRAFT_4276 at 81.240 kb on - strand, within EX28DRAFT_4276 at 81.240 kb on - strand, within EX28DRAFT_4276 at 81.243 kb on + strand, within EX28DRAFT_4276 at 81.370 kb on + strand, within EX28DRAFT_4276 at 81.472 kb on + strand, within EX28DRAFT_4276 at 81.472 kb on + strand, within EX28DRAFT_4276 at 81.473 kb on - strand, within EX28DRAFT_4276 at 81.495 kb on + strand, within EX28DRAFT_4276 at 81.496 kb on - strand, within EX28DRAFT_4276 at 81.496 kb on - strand, within EX28DRAFT_4276 at 81.544 kb on + strand, within EX28DRAFT_4276 at 81.544 kb on + strand, within EX28DRAFT_4276 at 81.545 kb on - strand, within EX28DRAFT_4276 at 81.545 kb on - strand, within EX28DRAFT_4276 at 81.937 kb on - strand, within EX28DRAFT_4276 at 82.018 kb on - strand at 82.018 kb on - strand at 82.058 kb on - strand at 82.071 kb on - strand at 82.071 kb on - strand at 82.135 kb on - strand, within EX28DRAFT_4277 at 82.150 kb on + strand, within EX28DRAFT_4277 at 82.150 kb on + strand, within EX28DRAFT_4277 at 82.151 kb on - strand, within EX28DRAFT_4277 at 82.153 kb on + strand, within EX28DRAFT_4277 at 82.330 kb on - strand at 82.345 kb on + strand at 82.345 kb on + strand at 82.414 kb on - strand, within EX28DRAFT_4278 at 82.414 kb on - strand, within EX28DRAFT_4278 at 82.508 kb on - strand, within EX28DRAFT_4278 at 82.650 kb on - strand, within EX28DRAFT_4278 at 82.725 kb on + strand, within EX28DRAFT_4278 at 82.726 kb on - strand, within EX28DRAFT_4278 at 82.789 kb on - strand at 82.792 kb on + strand at 82.792 kb on + strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.793 kb on - strand at 82.800 kb on + strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.804 kb on - strand at 82.805 kb on + strand at 82.821 kb on + strand at 82.822 kb on - strand at 82.875 kb on + strand at 82.917 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 80,044 - EX28DRAFT_4274 0.87 +0.4 80,209 + +2.0 80,210 - +0.0 80,224 - -1.1 80,574 + EX28DRAFT_4275 0.51 -0.2 80,607 + EX28DRAFT_4275 0.55 +0.3 80,642 - EX28DRAFT_4275 0.60 +0.1 80,642 - EX28DRAFT_4275 0.60 +0.5 80,718 + EX28DRAFT_4275 0.71 +0.1 80,718 + EX28DRAFT_4275 0.71 -0.2 80,719 - EX28DRAFT_4275 0.71 +1.9 80,719 - EX28DRAFT_4275 0.71 +0.7 80,719 - EX28DRAFT_4275 0.71 -0.1 80,719 - EX28DRAFT_4275 0.71 +1.1 80,719 - EX28DRAFT_4275 0.71 -0.5 80,719 - EX28DRAFT_4275 0.71 +0.4 80,719 - EX28DRAFT_4275 0.71 -0.0 80,829 + EX28DRAFT_4275 0.87 -0.5 80,829 + EX28DRAFT_4275 0.87 +1.0 80,830 - EX28DRAFT_4275 0.87 -0.3 80,906 + +1.4 80,910 + -0.1 80,910 + -0.2 80,910 + -0.8 80,911 - +0.6 80,911 - -0.9 80,911 - +0.9 80,949 - +2.2 80,977 + -0.3 81,174 + EX28DRAFT_4276 0.13 -1.1 81,175 - EX28DRAFT_4276 0.13 -0.5 81,239 + EX28DRAFT_4276 0.19 -0.4 81,239 + EX28DRAFT_4276 0.19 +0.1 81,240 - EX28DRAFT_4276 0.19 +0.0 81,240 - EX28DRAFT_4276 0.19 -0.9 81,243 + EX28DRAFT_4276 0.19 -0.5 81,370 + EX28DRAFT_4276 0.32 -0.3 81,472 + EX28DRAFT_4276 0.42 -2.6 81,472 + EX28DRAFT_4276 0.42 -0.5 81,473 - EX28DRAFT_4276 0.42 +0.7 81,495 + EX28DRAFT_4276 0.44 -1.0 81,496 - EX28DRAFT_4276 0.44 +0.0 81,496 - EX28DRAFT_4276 0.44 +0.0 81,544 + EX28DRAFT_4276 0.48 -0.1 81,544 + EX28DRAFT_4276 0.48 -0.1 81,545 - EX28DRAFT_4276 0.49 +0.4 81,545 - EX28DRAFT_4276 0.49 -0.7 81,937 - EX28DRAFT_4276 0.86 -0.5 82,018 - +0.3 82,018 - +0.0 82,058 - +0.6 82,071 - +0.3 82,071 - -0.3 82,135 - EX28DRAFT_4277 0.23 -0.4 82,150 + EX28DRAFT_4277 0.45 -0.7 82,150 + EX28DRAFT_4277 0.45 +0.2 82,151 - EX28DRAFT_4277 0.47 -0.5 82,153 + EX28DRAFT_4277 0.50 -0.2 82,330 - +0.5 82,345 + -0.4 82,345 + -0.1 82,414 - EX28DRAFT_4278 0.16 -0.9 82,414 - EX28DRAFT_4278 0.16 +0.2 82,508 - EX28DRAFT_4278 0.35 +2.0 82,650 - EX28DRAFT_4278 0.64 +0.1 82,725 + EX28DRAFT_4278 0.80 -0.2 82,726 - EX28DRAFT_4278 0.80 +2.6 82,789 - +1.6 82,792 + -0.3 82,792 + -0.0 82,793 - +0.0 82,793 - +0.2 82,793 - -0.5 82,793 - -0.3 82,793 - -0.2 82,793 - +0.0 82,793 - +0.1 82,793 - -0.2 82,800 + +0.3 82,804 - +0.7 82,804 - -0.8 82,804 - +0.1 82,804 - -0.4 82,804 - +1.6 82,805 + -0.1 82,821 + -0.4 82,822 - +0.9 82,875 + -0.1 82,917 - +2.8
Or see this region's nucleotide sequence