Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4113

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4111 and EX28DRAFT_4112 are separated by 167 nucleotidesEX28DRAFT_4112 and EX28DRAFT_4113 are separated by 113 nucleotidesEX28DRAFT_4113 and EX28DRAFT_4114 are separated by 177 nucleotides EX28DRAFT_4111: EX28DRAFT_4111 - conserved hypothetical integral membrane protein, at 82,847 to 83,512 _4111 EX28DRAFT_4112: EX28DRAFT_4112 - Predicted redox protein, regulator of disulfide bond formation, at 83,680 to 83,922 _4112 EX28DRAFT_4113: EX28DRAFT_4113 - membrane protein, MarC family, at 84,036 to 84,629 _4113 EX28DRAFT_4114: EX28DRAFT_4114 - aspartate-semialdehyde dehydrogenase, gamma-proteobacterial, at 84,807 to 85,910 _4114 Position (kb) 84 85Strain fitness (log2 ratio) -2 -1 0 1 2at 83.050 kb on + strand, within EX28DRAFT_4111at 83.165 kb on - strand, within EX28DRAFT_4111at 83.241 kb on + strand, within EX28DRAFT_4111at 83.241 kb on + strand, within EX28DRAFT_4111at 83.241 kb on + strand, within EX28DRAFT_4111at 83.242 kb on - strand, within EX28DRAFT_4111at 83.242 kb on - strand, within EX28DRAFT_4111at 83.263 kb on - strand, within EX28DRAFT_4111at 83.427 kb on + strand, within EX28DRAFT_4111at 83.428 kb on - strand, within EX28DRAFT_4111at 83.428 kb on - strand, within EX28DRAFT_4111at 83.512 kb on + strandat 83.512 kb on + strandat 83.513 kb on - strandat 83.650 kb on + strandat 83.651 kb on - strandat 83.651 kb on - strandat 83.920 kb on + strandat 83.921 kb on - strandat 83.940 kb on + strandat 83.940 kb on + strandat 83.941 kb on - strandat 83.974 kb on + strandat 83.974 kb on + strandat 83.974 kb on + strandat 83.974 kb on + strandat 83.974 kb on + strandat 84.177 kb on - strand, within EX28DRAFT_4113at 84.180 kb on - strand, within EX28DRAFT_4113at 84.375 kb on - strand, within EX28DRAFT_4113at 84.375 kb on - strand, within EX28DRAFT_4113at 84.395 kb on + strand, within EX28DRAFT_4113at 84.473 kb on + strand, within EX28DRAFT_4113at 84.546 kb on - strand, within EX28DRAFT_4113at 84.600 kb on + strandat 84.600 kb on + strandat 84.631 kb on + strandat 84.632 kb on - strandat 84.632 kb on - strandat 84.658 kb on + strandat 84.658 kb on + strandat 84.661 kb on + strandat 84.662 kb on - strandat 84.666 kb on + strandat 84.667 kb on - strandat 84.667 kb on - strandat 84.667 kb on - strandat 84.670 kb on + strandat 84.676 kb on + strandat 84.676 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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83,050 + EX28DRAFT_4111 0.30 +0.2
83,165 - EX28DRAFT_4111 0.48 -0.2
83,241 + EX28DRAFT_4111 0.59 +0.2
83,241 + EX28DRAFT_4111 0.59 +0.5
83,241 + EX28DRAFT_4111 0.59 -1.3
83,242 - EX28DRAFT_4111 0.59 +0.3
83,242 - EX28DRAFT_4111 0.59 +0.5
83,263 - EX28DRAFT_4111 0.62 -0.1
83,427 + EX28DRAFT_4111 0.87 +0.4
83,428 - EX28DRAFT_4111 0.87 +0.0
83,428 - EX28DRAFT_4111 0.87 -0.7
83,512 + -1.2
83,512 + -0.0
83,513 - +0.1
83,650 + -0.0
83,651 - +0.6
83,651 - -0.5
83,920 + -0.7
83,921 - -1.9
83,940 + +0.4
83,940 + +0.4
83,941 - -0.0
83,974 + -0.5
83,974 + +0.6
83,974 + -0.2
83,974 + +0.1
83,974 + +0.0
84,177 - EX28DRAFT_4113 0.24 -0.2
84,180 - EX28DRAFT_4113 0.24 +0.5
84,375 - EX28DRAFT_4113 0.57 +2.6
84,375 - EX28DRAFT_4113 0.57 -0.2
84,395 + EX28DRAFT_4113 0.60 +0.1
84,473 + EX28DRAFT_4113 0.74 -0.3
84,546 - EX28DRAFT_4113 0.86 +1.0
84,600 + +0.1
84,600 + -0.5
84,631 + -0.1
84,632 - -0.3
84,632 - +0.3
84,658 + -0.9
84,658 + +0.8
84,661 + -0.4
84,662 - -0.2
84,666 + -0.4
84,667 - +0.6
84,667 - -0.2
84,667 - -0.1
84,670 + +0.2
84,676 + -0.1
84,676 + -0.9

Or see this region's nucleotide sequence