Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3751 and EX28DRAFT_3752 are separated by 92 nucleotides EX28DRAFT_3752 and EX28DRAFT_3753 are separated by 111 nucleotides EX28DRAFT_3753 and EX28DRAFT_3754 are separated by 32 nucleotides
EX28DRAFT_3751: EX28DRAFT_3751 - Sugar diacid utilization regulator, at 431,141 to 432,298
_3751
EX28DRAFT_3752: EX28DRAFT_3752 - Protein of unknown function (DUF3461), at 432,391 to 432,777
_3752
EX28DRAFT_3753: EX28DRAFT_3753 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 432,889 to 433,713
_3753
EX28DRAFT_3754: EX28DRAFT_3754 - UTP--GlnB (protein PII) uridylyltransferase, GlnD, at 433,746 to 436,421
_3754
Position (kb) 432
433 Strain fitness (log2 ratio) -1
0
1
2
3 at 431.468 kb on - strand, within EX28DRAFT_3751 at 431.558 kb on - strand, within EX28DRAFT_3751 at 431.575 kb on + strand, within EX28DRAFT_3751 at 431.575 kb on + strand, within EX28DRAFT_3751 at 431.576 kb on - strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.990 kb on + strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 432.198 kb on - strand at 432.266 kb on + strand at 432.296 kb on + strand at 432.297 kb on - strand at 432.297 kb on - strand at 432.297 kb on - strand at 432.446 kb on - strand, within EX28DRAFT_3752 at 432.546 kb on - strand, within EX28DRAFT_3752 at 432.546 kb on - strand, within EX28DRAFT_3752 at 432.592 kb on + strand, within EX28DRAFT_3752 at 432.615 kb on + strand, within EX28DRAFT_3752 at 432.629 kb on + strand, within EX28DRAFT_3752 at 432.748 kb on - strand at 432.773 kb on + strand at 432.849 kb on + strand at 433.745 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 431,468 - EX28DRAFT_3751 0.28 +0.1 431,558 - EX28DRAFT_3751 0.36 -0.0 431,575 + EX28DRAFT_3751 0.37 +3.6 431,575 + EX28DRAFT_3751 0.37 -0.4 431,576 - EX28DRAFT_3751 0.38 +0.2 431,897 + EX28DRAFT_3751 0.65 -0.1 431,897 + EX28DRAFT_3751 0.65 -0.4 431,897 + EX28DRAFT_3751 0.65 -0.1 431,897 + EX28DRAFT_3751 0.65 -0.4 431,898 - EX28DRAFT_3751 0.65 +2.5 431,898 - EX28DRAFT_3751 0.65 -0.1 431,898 - EX28DRAFT_3751 0.65 -1.0 431,990 + EX28DRAFT_3751 0.73 +0.2 431,991 - EX28DRAFT_3751 0.73 +0.1 431,991 - EX28DRAFT_3751 0.73 +0.3 431,991 - EX28DRAFT_3751 0.73 +0.1 431,991 - EX28DRAFT_3751 0.73 -1.6 432,198 - +1.4 432,266 + +0.6 432,296 + +0.0 432,297 - +0.7 432,297 - +0.3 432,297 - -0.4 432,446 - EX28DRAFT_3752 0.14 +1.2 432,546 - EX28DRAFT_3752 0.40 +0.8 432,546 - EX28DRAFT_3752 0.40 +0.4 432,592 + EX28DRAFT_3752 0.52 -0.2 432,615 + EX28DRAFT_3752 0.58 +1.1 432,629 + EX28DRAFT_3752 0.61 -0.6 432,748 - -0.2 432,773 + +0.3 432,849 + -0.4 433,745 - -0.1
Or see this region's nucleotide sequence