Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3634

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_3632 and EX28DRAFT_3633 overlap by 1 nucleotidesEX28DRAFT_3633 and EX28DRAFT_3634 are separated by 52 nucleotidesEX28DRAFT_3634 and EX28DRAFT_3635 are separated by 1 nucleotides EX28DRAFT_3632: EX28DRAFT_3632 - Isoleucyl-tRNA synthetase (EC 6.1.1.5), at 291,186 to 294,002 _3632 EX28DRAFT_3633: EX28DRAFT_3633 - lipoprotein signal peptidase, at 294,002 to 294,502 _3633 EX28DRAFT_3634: EX28DRAFT_3634 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 294,555 to 295,004 _3634 EX28DRAFT_3635: EX28DRAFT_3635 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2), at 295,006 to 295,956 _3635 Position (kb) 294 295 296Strain fitness (log2 ratio) -1 0 1at 294.560 kb on + strandat 294.914 kb on + strand, within EX28DRAFT_3634at 294.914 kb on + strand, within EX28DRAFT_3634at 295.954 kb on + strandat 295.955 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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294,560 + -1.2
294,914 + EX28DRAFT_3634 0.80 -1.7
294,914 + EX28DRAFT_3634 0.80 -0.2
295,954 + +0.9
295,955 - -0.1

Or see this region's nucleotide sequence