Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3272 and EX28DRAFT_3273 are separated by 138 nucleotides EX28DRAFT_3273 and EX28DRAFT_3274 overlap by 21 nucleotides
EX28DRAFT_3272: EX28DRAFT_3272 - Dihydroxyacetone kinase, at 564,910 to 566,556
_3272
EX28DRAFT_3273: EX28DRAFT_3273 - Predicted ATPase, at 566,695 to 568,197
_3273
EX28DRAFT_3274: EX28DRAFT_3274 - radical SAM protein, TIGR01212 family, at 568,177 to 569,160
_3274
Position (kb) 566
567
568
569 Strain fitness (log2 ratio) -1
0
1 at 565.900 kb on + strand, within EX28DRAFT_3272 at 565.901 kb on - strand, within EX28DRAFT_3272 at 565.901 kb on - strand, within EX28DRAFT_3272 at 565.933 kb on - strand, within EX28DRAFT_3272 at 565.935 kb on + strand, within EX28DRAFT_3272 at 566.079 kb on + strand, within EX28DRAFT_3272 at 566.104 kb on - strand, within EX28DRAFT_3272 at 566.461 kb on + strand at 566.595 kb on - strand at 566.632 kb on + strand at 566.633 kb on - strand at 566.660 kb on + strand at 566.661 kb on - strand at 566.662 kb on + strand at 566.700 kb on + strand at 566.701 kb on - strand at 566.701 kb on - strand at 566.711 kb on + strand at 566.991 kb on + strand, within EX28DRAFT_3273 at 567.103 kb on - strand, within EX28DRAFT_3273 at 567.103 kb on - strand, within EX28DRAFT_3273 at 567.103 kb on - strand, within EX28DRAFT_3273 at 567.172 kb on + strand, within EX28DRAFT_3273 at 567.172 kb on + strand, within EX28DRAFT_3273 at 567.176 kb on + strand, within EX28DRAFT_3273 at 567.254 kb on + strand, within EX28DRAFT_3273 at 567.380 kb on - strand, within EX28DRAFT_3273 at 567.434 kb on - strand, within EX28DRAFT_3273 at 567.527 kb on + strand, within EX28DRAFT_3273 at 567.798 kb on + strand, within EX28DRAFT_3273 at 568.036 kb on - strand, within EX28DRAFT_3273 at 568.152 kb on - strand at 568.176 kb on - strand at 568.396 kb on - strand, within EX28DRAFT_3274 at 568.396 kb on - strand, within EX28DRAFT_3274 at 568.396 kb on - strand, within EX28DRAFT_3274 at 568.397 kb on + strand, within EX28DRAFT_3274 at 568.485 kb on + strand, within EX28DRAFT_3274 at 568.707 kb on - strand, within EX28DRAFT_3274 at 568.818 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.822 kb on - strand, within EX28DRAFT_3274 at 568.859 kb on + strand, within EX28DRAFT_3274 at 569.095 kb on - strand at 569.101 kb on + strand at 569.111 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 565,900 + EX28DRAFT_3272 0.60 -0.6 565,901 - EX28DRAFT_3272 0.60 +0.3 565,901 - EX28DRAFT_3272 0.60 -0.4 565,933 - EX28DRAFT_3272 0.62 +0.1 565,935 + EX28DRAFT_3272 0.62 +1.5 566,079 + EX28DRAFT_3272 0.71 -0.2 566,104 - EX28DRAFT_3272 0.72 -0.6 566,461 + +0.5 566,595 - -0.3 566,632 + +0.1 566,633 - -0.4 566,660 + +0.4 566,661 - -1.5 566,662 + -0.8 566,700 + +0.6 566,701 - -0.1 566,701 - +0.3 566,711 + -0.1 566,991 + EX28DRAFT_3273 0.20 +0.0 567,103 - EX28DRAFT_3273 0.27 -0.4 567,103 - EX28DRAFT_3273 0.27 +0.5 567,103 - EX28DRAFT_3273 0.27 -1.0 567,172 + EX28DRAFT_3273 0.32 -0.4 567,172 + EX28DRAFT_3273 0.32 +0.8 567,176 + EX28DRAFT_3273 0.32 +0.6 567,254 + EX28DRAFT_3273 0.37 +0.3 567,380 - EX28DRAFT_3273 0.46 +0.5 567,434 - EX28DRAFT_3273 0.49 +0.7 567,527 + EX28DRAFT_3273 0.55 +1.2 567,798 + EX28DRAFT_3273 0.73 +0.7 568,036 - EX28DRAFT_3273 0.89 +0.6 568,152 - +0.2 568,176 - -0.3 568,396 - EX28DRAFT_3274 0.22 +0.0 568,396 - EX28DRAFT_3274 0.22 -1.2 568,396 - EX28DRAFT_3274 0.22 +0.8 568,397 + EX28DRAFT_3274 0.22 +0.2 568,485 + EX28DRAFT_3274 0.31 +0.2 568,707 - EX28DRAFT_3274 0.54 +0.5 568,818 - EX28DRAFT_3274 0.65 -0.1 568,822 - EX28DRAFT_3274 0.66 -0.2 568,822 - EX28DRAFT_3274 0.66 -0.1 568,822 - EX28DRAFT_3274 0.66 -1.7 568,822 - EX28DRAFT_3274 0.66 +0.9 568,859 + EX28DRAFT_3274 0.69 +0.1 569,095 - +1.7 569,101 + +0.0 569,111 - -0.1
Or see this region's nucleotide sequence