Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3243 and EX28DRAFT_3244 are separated by 50 nucleotides EX28DRAFT_3244 and EX28DRAFT_3245 are separated by 126 nucleotides EX28DRAFT_3245 and EX28DRAFT_3246 overlap by 1 nucleotides
EX28DRAFT_3243: EX28DRAFT_3243 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 538,685 to 539,944
_3243
EX28DRAFT_3244: EX28DRAFT_3244 - Predicted transcriptional regulator, BolA superfamily, at 539,995 to 540,249
_3244
EX28DRAFT_3245: EX28DRAFT_3245 - Predicted NTP binding protein (contains STAS domain), at 540,376 to 540,669
_3245
EX28DRAFT_3246: EX28DRAFT_3246 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 540,669 to 541,304
_3246
Position (kb) 539
540
541 Strain fitness (log2 ratio) -1
0
1 at 539.958 kb on - strand at 539.960 kb on - strand at 540.008 kb on - strand at 540.084 kb on - strand, within EX28DRAFT_3244 at 540.258 kb on - strand at 540.292 kb on - strand at 540.313 kb on - strand at 540.360 kb on + strand at 540.408 kb on - strand, within EX28DRAFT_3245 at 540.538 kb on + strand, within EX28DRAFT_3245 at 540.671 kb on - strand at 540.671 kb on - strand at 540.671 kb on - strand at 540.917 kb on + strand, within EX28DRAFT_3246 at 540.955 kb on + strand, within EX28DRAFT_3246 at 540.955 kb on + strand, within EX28DRAFT_3246 at 540.956 kb on - strand, within EX28DRAFT_3246 at 540.971 kb on - strand, within EX28DRAFT_3246 at 541.027 kb on + strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.063 kb on + strand, within EX28DRAFT_3246 at 541.064 kb on - strand, within EX28DRAFT_3246 at 541.090 kb on + strand, within EX28DRAFT_3246 at 541.151 kb on + strand, within EX28DRAFT_3246 at 541.164 kb on - strand, within EX28DRAFT_3246
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 539,958 - -0.5 539,960 - -0.2 540,008 - -0.6 540,084 - EX28DRAFT_3244 0.35 -0.3 540,258 - +0.6 540,292 - -0.7 540,313 - -0.5 540,360 + -0.6 540,408 - EX28DRAFT_3245 0.11 -0.9 540,538 + EX28DRAFT_3245 0.55 +0.8 540,671 - +0.5 540,671 - -0.6 540,671 - -0.0 540,917 + EX28DRAFT_3246 0.39 +0.4 540,955 + EX28DRAFT_3246 0.45 -0.2 540,955 + EX28DRAFT_3246 0.45 -0.3 540,956 - EX28DRAFT_3246 0.45 +0.7 540,971 - EX28DRAFT_3246 0.47 -0.7 541,027 + EX28DRAFT_3246 0.56 -0.8 541,061 - EX28DRAFT_3246 0.62 +0.1 541,061 - EX28DRAFT_3246 0.62 -0.1 541,061 - EX28DRAFT_3246 0.62 -0.4 541,063 + EX28DRAFT_3246 0.62 +0.3 541,064 - EX28DRAFT_3246 0.62 -0.4 541,090 + EX28DRAFT_3246 0.66 -0.2 541,151 + EX28DRAFT_3246 0.76 +0.3 541,164 - EX28DRAFT_3246 0.78 +0.3
Or see this region's nucleotide sequence