Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3209 and EX28DRAFT_3210 are separated by 62 nucleotides EX28DRAFT_3210 and EX28DRAFT_3211 are separated by 142 nucleotides
EX28DRAFT_3209: EX28DRAFT_3209 - luciferase family oxidoreductase, group 1, at 507,414 to 508,421
_3209
EX28DRAFT_3210: EX28DRAFT_3210 - aromatic amino acid transport protein, at 508,484 to 509,728
_3210
EX28DRAFT_3211: EX28DRAFT_3211 - Superfamily II DNA and RNA helicases, at 509,871 to 511,766
_3211
Position (kb) 508
509
510 Strain fitness (log2 ratio) -2
-1
0
1
2 at 507.566 kb on + strand, within EX28DRAFT_3209 at 507.566 kb on + strand, within EX28DRAFT_3209 at 507.567 kb on - strand, within EX28DRAFT_3209 at 507.567 kb on - strand, within EX28DRAFT_3209 at 507.623 kb on + strand, within EX28DRAFT_3209 at 507.624 kb on - strand, within EX28DRAFT_3209 at 507.624 kb on - strand, within EX28DRAFT_3209 at 507.624 kb on - strand, within EX28DRAFT_3209 at 507.736 kb on + strand, within EX28DRAFT_3209 at 508.083 kb on - strand, within EX28DRAFT_3209 at 508.131 kb on - strand, within EX28DRAFT_3209 at 508.233 kb on + strand, within EX28DRAFT_3209 at 508.334 kb on + strand at 508.334 kb on + strand at 508.334 kb on + strand at 508.492 kb on - strand at 508.616 kb on - strand, within EX28DRAFT_3210 at 508.625 kb on - strand, within EX28DRAFT_3210 at 508.625 kb on - strand, within EX28DRAFT_3210 at 508.661 kb on - strand, within EX28DRAFT_3210 at 508.661 kb on - strand, within EX28DRAFT_3210 at 508.692 kb on + strand, within EX28DRAFT_3210 at 508.693 kb on - strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.010 kb on + strand, within EX28DRAFT_3210 at 509.011 kb on - strand, within EX28DRAFT_3210 at 509.079 kb on + strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.080 kb on - strand, within EX28DRAFT_3210 at 509.258 kb on + strand, within EX28DRAFT_3210 at 509.261 kb on + strand, within EX28DRAFT_3210 at 509.430 kb on + strand, within EX28DRAFT_3210 at 509.430 kb on + strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.431 kb on - strand, within EX28DRAFT_3210 at 509.435 kb on + strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.436 kb on - strand, within EX28DRAFT_3210 at 509.523 kb on + strand, within EX28DRAFT_3210 at 509.841 kb on - strand at 509.843 kb on - strand at 509.853 kb on - strand at 509.866 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 507,566 + EX28DRAFT_3209 0.15 -0.3 507,566 + EX28DRAFT_3209 0.15 +0.4 507,567 - EX28DRAFT_3209 0.15 -0.1 507,567 - EX28DRAFT_3209 0.15 +0.1 507,623 + EX28DRAFT_3209 0.21 +0.1 507,624 - EX28DRAFT_3209 0.21 +0.6 507,624 - EX28DRAFT_3209 0.21 +0.4 507,624 - EX28DRAFT_3209 0.21 -0.0 507,736 + EX28DRAFT_3209 0.32 -0.1 508,083 - EX28DRAFT_3209 0.66 +0.1 508,131 - EX28DRAFT_3209 0.71 +0.1 508,233 + EX28DRAFT_3209 0.81 -0.1 508,334 + +0.3 508,334 + +0.8 508,334 + +1.4 508,492 - +0.3 508,616 - EX28DRAFT_3210 0.11 -0.6 508,625 - EX28DRAFT_3210 0.11 -0.1 508,625 - EX28DRAFT_3210 0.11 +1.1 508,661 - EX28DRAFT_3210 0.14 +0.1 508,661 - EX28DRAFT_3210 0.14 -0.2 508,692 + EX28DRAFT_3210 0.17 +0.4 508,693 - EX28DRAFT_3210 0.17 -0.2 509,010 + EX28DRAFT_3210 0.42 -1.6 509,010 + EX28DRAFT_3210 0.42 +0.2 509,010 + EX28DRAFT_3210 0.42 +1.5 509,011 - EX28DRAFT_3210 0.42 -0.4 509,079 + EX28DRAFT_3210 0.48 -0.8 509,080 - EX28DRAFT_3210 0.48 +0.2 509,080 - EX28DRAFT_3210 0.48 +0.1 509,080 - EX28DRAFT_3210 0.48 -0.1 509,258 + EX28DRAFT_3210 0.62 +0.0 509,261 + EX28DRAFT_3210 0.62 +0.2 509,430 + EX28DRAFT_3210 0.76 -0.6 509,430 + EX28DRAFT_3210 0.76 -0.5 509,431 - EX28DRAFT_3210 0.76 -0.0 509,431 - EX28DRAFT_3210 0.76 +0.6 509,431 - EX28DRAFT_3210 0.76 -0.1 509,435 + EX28DRAFT_3210 0.76 -2.0 509,436 - EX28DRAFT_3210 0.76 +0.0 509,436 - EX28DRAFT_3210 0.76 +2.1 509,436 - EX28DRAFT_3210 0.76 +0.2 509,523 + EX28DRAFT_3210 0.83 +0.1 509,841 - -0.6 509,843 - -0.5 509,853 - +0.2 509,866 - -0.1
Or see this region's nucleotide sequence