Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2968 and EX28DRAFT_2969 are separated by 91 nucleotides EX28DRAFT_2969 and EX28DRAFT_2970 are separated by 145 nucleotides EX28DRAFT_2970 and EX28DRAFT_2971 are separated by 186 nucleotides
EX28DRAFT_2968: EX28DRAFT_2968 - Uncharacterized conserved protein, at 277,835 to 278,575
_2968
EX28DRAFT_2969: EX28DRAFT_2969 - L-lysine exporter, at 278,667 to 279,302
_2969
EX28DRAFT_2970: EX28DRAFT_2970 - Small-conductance mechanosensitive channel, at 279,448 to 280,302
_2970
EX28DRAFT_2971: EX28DRAFT_2971 - fructose-bisphosphate aldolase (EC 4.1.2.13), at 280,489 to 281,568
_2971
Position (kb) 279
280
281 Strain fitness (log2 ratio) -1
0
1
2 at 278.541 kb on - strand at 278.544 kb on - strand at 278.544 kb on - strand at 278.579 kb on + strand at 278.633 kb on - strand at 278.656 kb on + strand at 278.656 kb on + strand at 278.657 kb on - strand at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.754 kb on + strand, within EX28DRAFT_2969 at 278.755 kb on - strand, within EX28DRAFT_2969 at 278.926 kb on + strand, within EX28DRAFT_2969 at 278.927 kb on - strand, within EX28DRAFT_2969 at 278.927 kb on - strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.961 kb on - strand, within EX28DRAFT_2969 at 278.961 kb on - strand, within EX28DRAFT_2969 at 278.964 kb on - strand, within EX28DRAFT_2969 at 278.964 kb on - strand, within EX28DRAFT_2969 at 279.055 kb on + strand, within EX28DRAFT_2969 at 279.270 kb on + strand at 279.338 kb on + strand at 279.338 kb on + strand at 279.353 kb on - strand at 279.398 kb on - strand at 279.405 kb on + strand at 279.450 kb on - strand at 279.450 kb on - strand at 279.478 kb on + strand at 279.478 kb on + strand at 279.479 kb on - strand at 279.479 kb on - strand at 279.479 kb on - strand at 279.722 kb on + strand, within EX28DRAFT_2970 at 279.900 kb on - strand, within EX28DRAFT_2970 at 279.900 kb on - strand, within EX28DRAFT_2970 at 280.062 kb on + strand, within EX28DRAFT_2970 at 280.063 kb on - strand, within EX28DRAFT_2970 at 280.156 kb on - strand, within EX28DRAFT_2970 at 280.160 kb on - strand, within EX28DRAFT_2970 at 280.282 kb on + strand at 280.282 kb on + strand at 280.283 kb on - strand at 280.304 kb on + strand at 280.389 kb on + strand at 280.490 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 278,541 - -0.0 278,544 - -0.2 278,544 - +0.5 278,579 + +0.7 278,633 - +1.0 278,656 + +0.1 278,656 + +1.1 278,657 - +0.2 278,750 + EX28DRAFT_2969 0.13 +0.4 278,750 + EX28DRAFT_2969 0.13 +0.4 278,750 + EX28DRAFT_2969 0.13 -0.1 278,751 - EX28DRAFT_2969 0.13 -0.4 278,751 - EX28DRAFT_2969 0.13 -0.8 278,754 + EX28DRAFT_2969 0.14 +0.3 278,755 - EX28DRAFT_2969 0.14 +0.6 278,926 + EX28DRAFT_2969 0.41 -0.2 278,927 - EX28DRAFT_2969 0.41 -0.1 278,927 - EX28DRAFT_2969 0.41 +0.2 278,960 + EX28DRAFT_2969 0.46 -0.4 278,960 + EX28DRAFT_2969 0.46 +0.1 278,960 + EX28DRAFT_2969 0.46 -0.2 278,960 + EX28DRAFT_2969 0.46 +2.2 278,961 - EX28DRAFT_2969 0.46 +0.7 278,961 - EX28DRAFT_2969 0.46 -0.2 278,964 - EX28DRAFT_2969 0.47 +0.8 278,964 - EX28DRAFT_2969 0.47 +0.2 279,055 + EX28DRAFT_2969 0.61 +0.1 279,270 + +0.5 279,338 + -0.3 279,338 + +0.2 279,353 - +0.2 279,398 - -0.7 279,405 + +0.3 279,450 - +0.0 279,450 - -0.4 279,478 + -0.7 279,478 + -0.3 279,479 - +0.9 279,479 - +0.6 279,479 - +0.1 279,722 + EX28DRAFT_2970 0.32 -0.3 279,900 - EX28DRAFT_2970 0.53 -0.3 279,900 - EX28DRAFT_2970 0.53 -0.3 280,062 + EX28DRAFT_2970 0.72 -0.8 280,063 - EX28DRAFT_2970 0.72 +0.4 280,156 - EX28DRAFT_2970 0.83 -0.2 280,160 - EX28DRAFT_2970 0.83 +0.3 280,282 + -0.0 280,282 + -1.5 280,283 - +0.0 280,304 + -0.6 280,389 + -0.0 280,490 + -0.4
Or see this region's nucleotide sequence