Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2967 and EX28DRAFT_2968 are separated by 48 nucleotides EX28DRAFT_2968 and EX28DRAFT_2969 are separated by 91 nucleotides EX28DRAFT_2969 and EX28DRAFT_2970 are separated by 145 nucleotides
EX28DRAFT_2967: EX28DRAFT_2967 - transcriptional regulator, ArgP family, at 276,893 to 277,786
_2967
EX28DRAFT_2968: EX28DRAFT_2968 - Uncharacterized conserved protein, at 277,835 to 278,575
_2968
EX28DRAFT_2969: EX28DRAFT_2969 - L-lysine exporter, at 278,667 to 279,302
_2969
EX28DRAFT_2970: EX28DRAFT_2970 - Small-conductance mechanosensitive channel, at 279,448 to 280,302
_2970
Position (kb) 277
278
279 Strain fitness (log2 ratio) -2
-1
0
1
2 at 276.854 kb on + strand at 276.864 kb on + strand at 276.864 kb on + strand at 276.875 kb on - strand at 276.918 kb on + strand at 276.918 kb on + strand at 276.918 kb on + strand at 276.938 kb on - strand at 277.007 kb on - strand, within EX28DRAFT_2967 at 277.676 kb on + strand, within EX28DRAFT_2967 at 277.694 kb on + strand, within EX28DRAFT_2967 at 277.695 kb on - strand, within EX28DRAFT_2967 at 277.784 kb on + strand at 277.836 kb on + strand at 277.847 kb on - strand at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.932 kb on + strand, within EX28DRAFT_2968 at 277.933 kb on - strand, within EX28DRAFT_2968 at 278.002 kb on + strand, within EX28DRAFT_2968 at 278.003 kb on - strand, within EX28DRAFT_2968 at 278.003 kb on - strand, within EX28DRAFT_2968 at 278.026 kb on - strand, within EX28DRAFT_2968 at 278.200 kb on + strand, within EX28DRAFT_2968 at 278.200 kb on + strand, within EX28DRAFT_2968 at 278.201 kb on - strand, within EX28DRAFT_2968 at 278.206 kb on + strand, within EX28DRAFT_2968 at 278.206 kb on + strand, within EX28DRAFT_2968 at 278.270 kb on - strand, within EX28DRAFT_2968 at 278.286 kb on + strand, within EX28DRAFT_2968 at 278.287 kb on - strand, within EX28DRAFT_2968 at 278.299 kb on + strand, within EX28DRAFT_2968 at 278.299 kb on + strand, within EX28DRAFT_2968 at 278.300 kb on - strand, within EX28DRAFT_2968 at 278.303 kb on + strand, within EX28DRAFT_2968 at 278.303 kb on + strand, within EX28DRAFT_2968 at 278.304 kb on - strand, within EX28DRAFT_2968 at 278.319 kb on + strand, within EX28DRAFT_2968 at 278.321 kb on - strand, within EX28DRAFT_2968 at 278.329 kb on + strand, within EX28DRAFT_2968 at 278.330 kb on - strand, within EX28DRAFT_2968 at 278.333 kb on + strand, within EX28DRAFT_2968 at 278.362 kb on - strand, within EX28DRAFT_2968 at 278.541 kb on - strand at 278.544 kb on - strand at 278.544 kb on - strand at 278.579 kb on + strand at 278.633 kb on - strand at 278.656 kb on + strand at 278.656 kb on + strand at 278.657 kb on - strand at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.750 kb on + strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.751 kb on - strand, within EX28DRAFT_2969 at 278.754 kb on + strand, within EX28DRAFT_2969 at 278.755 kb on - strand, within EX28DRAFT_2969 at 278.926 kb on + strand, within EX28DRAFT_2969 at 278.927 kb on - strand, within EX28DRAFT_2969 at 278.927 kb on - strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.960 kb on + strand, within EX28DRAFT_2969 at 278.961 kb on - strand, within EX28DRAFT_2969 at 278.961 kb on - strand, within EX28DRAFT_2969 at 278.964 kb on - strand, within EX28DRAFT_2969 at 278.964 kb on - strand, within EX28DRAFT_2969 at 279.055 kb on + strand, within EX28DRAFT_2969 at 279.270 kb on + strand at 279.338 kb on + strand at 279.338 kb on + strand at 279.353 kb on - strand at 279.398 kb on - strand at 279.405 kb on + strand at 279.450 kb on - strand at 279.450 kb on - strand at 279.478 kb on + strand at 279.478 kb on + strand at 279.479 kb on - strand at 279.479 kb on - strand at 279.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 276,854 + +0.0 276,864 + +0.1 276,864 + -0.5 276,875 - +0.1 276,918 + -1.0 276,918 + -0.9 276,918 + -1.1 276,938 - -0.8 277,007 - EX28DRAFT_2967 0.13 -0.4 277,676 + EX28DRAFT_2967 0.88 -0.6 277,694 + EX28DRAFT_2967 0.90 -0.2 277,695 - EX28DRAFT_2967 0.90 -0.7 277,784 + +0.1 277,836 + +0.2 277,847 - +0.4 277,932 + EX28DRAFT_2968 0.13 -0.1 277,932 + EX28DRAFT_2968 0.13 -0.5 277,932 + EX28DRAFT_2968 0.13 -0.2 277,933 - EX28DRAFT_2968 0.13 -0.0 278,002 + EX28DRAFT_2968 0.23 -0.7 278,003 - EX28DRAFT_2968 0.23 -0.8 278,003 - EX28DRAFT_2968 0.23 +0.2 278,026 - EX28DRAFT_2968 0.26 -0.4 278,200 + EX28DRAFT_2968 0.49 +0.9 278,200 + EX28DRAFT_2968 0.49 +0.4 278,201 - EX28DRAFT_2968 0.49 +0.9 278,206 + EX28DRAFT_2968 0.50 +0.3 278,206 + EX28DRAFT_2968 0.50 +0.0 278,270 - EX28DRAFT_2968 0.59 -0.1 278,286 + EX28DRAFT_2968 0.61 -2.1 278,287 - EX28DRAFT_2968 0.61 +0.2 278,299 + EX28DRAFT_2968 0.63 +0.1 278,299 + EX28DRAFT_2968 0.63 -0.6 278,300 - EX28DRAFT_2968 0.63 -0.4 278,303 + EX28DRAFT_2968 0.63 -0.4 278,303 + EX28DRAFT_2968 0.63 +0.7 278,304 - EX28DRAFT_2968 0.63 -0.3 278,319 + EX28DRAFT_2968 0.65 -0.6 278,321 - EX28DRAFT_2968 0.66 +0.1 278,329 + EX28DRAFT_2968 0.67 +0.0 278,330 - EX28DRAFT_2968 0.67 -0.4 278,333 + EX28DRAFT_2968 0.67 +1.5 278,362 - EX28DRAFT_2968 0.71 -0.2 278,541 - -0.0 278,544 - -0.2 278,544 - +0.5 278,579 + +0.7 278,633 - +1.0 278,656 + +0.1 278,656 + +1.1 278,657 - +0.2 278,750 + EX28DRAFT_2969 0.13 +0.4 278,750 + EX28DRAFT_2969 0.13 +0.4 278,750 + EX28DRAFT_2969 0.13 -0.1 278,751 - EX28DRAFT_2969 0.13 -0.4 278,751 - EX28DRAFT_2969 0.13 -0.8 278,754 + EX28DRAFT_2969 0.14 +0.3 278,755 - EX28DRAFT_2969 0.14 +0.6 278,926 + EX28DRAFT_2969 0.41 -0.2 278,927 - EX28DRAFT_2969 0.41 -0.1 278,927 - EX28DRAFT_2969 0.41 +0.2 278,960 + EX28DRAFT_2969 0.46 -0.4 278,960 + EX28DRAFT_2969 0.46 +0.1 278,960 + EX28DRAFT_2969 0.46 -0.2 278,960 + EX28DRAFT_2969 0.46 +2.2 278,961 - EX28DRAFT_2969 0.46 +0.7 278,961 - EX28DRAFT_2969 0.46 -0.2 278,964 - EX28DRAFT_2969 0.47 +0.8 278,964 - EX28DRAFT_2969 0.47 +0.2 279,055 + EX28DRAFT_2969 0.61 +0.1 279,270 + +0.5 279,338 + -0.3 279,338 + +0.2 279,353 - +0.2 279,398 - -0.7 279,405 + +0.3 279,450 - +0.0 279,450 - -0.4 279,478 + -0.7 279,478 + -0.3 279,479 - +0.9 279,479 - +0.6 279,479 - +0.1
Or see this region's nucleotide sequence