Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2824 and EX28DRAFT_2825 overlap by 1 nucleotides EX28DRAFT_2825 and EX28DRAFT_2826 are separated by 16 nucleotides
EX28DRAFT_2824: EX28DRAFT_2824 - ABC-type Fe3+-siderophore transport system, permease component, at 127,709 to 128,746
_2824
EX28DRAFT_2825: EX28DRAFT_2825 - ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components, at 128,746 to 129,507
_2825
EX28DRAFT_2826: EX28DRAFT_2826 - Major Facilitator Superfamily, at 129,524 to 130,744
_2826
Position (kb) 128
129
130 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 127.847 kb on + strand, within EX28DRAFT_2824 at 127.847 kb on + strand, within EX28DRAFT_2824 at 127.848 kb on - strand, within EX28DRAFT_2824 at 127.899 kb on - strand, within EX28DRAFT_2824 at 128.073 kb on + strand, within EX28DRAFT_2824 at 128.188 kb on + strand, within EX28DRAFT_2824 at 128.189 kb on - strand, within EX28DRAFT_2824 at 128.240 kb on + strand, within EX28DRAFT_2824 at 128.437 kb on + strand, within EX28DRAFT_2824 at 128.438 kb on - strand, within EX28DRAFT_2824 at 128.438 kb on - strand, within EX28DRAFT_2824 at 128.438 kb on - strand, within EX28DRAFT_2824 at 128.438 kb on - strand, within EX28DRAFT_2824 at 128.438 kb on - strand, within EX28DRAFT_2824 at 128.722 kb on + strand at 128.722 kb on + strand at 128.723 kb on - strand at 128.723 kb on - strand at 128.741 kb on - strand at 128.781 kb on - strand at 128.866 kb on - strand, within EX28DRAFT_2825 at 129.135 kb on + strand, within EX28DRAFT_2825 at 129.136 kb on - strand, within EX28DRAFT_2825 at 129.189 kb on + strand, within EX28DRAFT_2825 at 129.409 kb on - strand, within EX28DRAFT_2825 at 129.414 kb on - strand, within EX28DRAFT_2825 at 129.564 kb on + strand at 129.600 kb on - strand at 129.826 kb on + strand, within EX28DRAFT_2826 at 130.056 kb on + strand, within EX28DRAFT_2826 at 130.057 kb on - strand, within EX28DRAFT_2826 at 130.082 kb on + strand, within EX28DRAFT_2826 at 130.175 kb on - strand, within EX28DRAFT_2826 at 130.185 kb on - strand, within EX28DRAFT_2826 at 130.205 kb on + strand, within EX28DRAFT_2826 at 130.311 kb on + strand, within EX28DRAFT_2826 at 130.311 kb on + strand, within EX28DRAFT_2826 at 130.312 kb on - strand, within EX28DRAFT_2826 at 130.354 kb on - strand, within EX28DRAFT_2826
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 127,847 + EX28DRAFT_2824 0.13 +0.6 127,847 + EX28DRAFT_2824 0.13 +0.0 127,848 - EX28DRAFT_2824 0.13 +0.3 127,899 - EX28DRAFT_2824 0.18 +0.2 128,073 + EX28DRAFT_2824 0.35 +0.0 128,188 + EX28DRAFT_2824 0.46 +0.3 128,189 - EX28DRAFT_2824 0.46 +0.2 128,240 + EX28DRAFT_2824 0.51 -0.7 128,437 + EX28DRAFT_2824 0.70 -2.4 128,438 - EX28DRAFT_2824 0.70 +0.2 128,438 - EX28DRAFT_2824 0.70 +0.7 128,438 - EX28DRAFT_2824 0.70 -0.1 128,438 - EX28DRAFT_2824 0.70 +3.4 128,438 - EX28DRAFT_2824 0.70 +0.1 128,722 + -0.0 128,722 + -0.3 128,723 - -0.1 128,723 - +0.1 128,741 - -0.0 128,781 - -0.1 128,866 - EX28DRAFT_2825 0.16 -0.4 129,135 + EX28DRAFT_2825 0.51 -0.2 129,136 - EX28DRAFT_2825 0.51 -0.5 129,189 + EX28DRAFT_2825 0.58 +0.3 129,409 - EX28DRAFT_2825 0.87 -0.6 129,414 - EX28DRAFT_2825 0.88 -1.9 129,564 + +0.2 129,600 - -0.0 129,826 + EX28DRAFT_2826 0.25 -0.4 130,056 + EX28DRAFT_2826 0.44 +0.2 130,057 - EX28DRAFT_2826 0.44 +0.3 130,082 + EX28DRAFT_2826 0.46 -0.2 130,175 - EX28DRAFT_2826 0.53 +0.2 130,185 - EX28DRAFT_2826 0.54 +0.1 130,205 + EX28DRAFT_2826 0.56 -0.1 130,311 + EX28DRAFT_2826 0.64 -0.0 130,311 + EX28DRAFT_2826 0.64 -0.0 130,312 - EX28DRAFT_2826 0.65 +1.0 130,354 - EX28DRAFT_2826 0.68 +0.3
Or see this region's nucleotide sequence