Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2763

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2762 and EX28DRAFT_2763 are separated by 331 nucleotidesEX28DRAFT_2763 and EX28DRAFT_2764 overlap by 17 nucleotides EX28DRAFT_2762: EX28DRAFT_2762 - ribonucleoside-diphosphate reductase, class 1b, beta subunit, at 68,936 to 69,895 _2762 EX28DRAFT_2763: EX28DRAFT_2763 - glycine betaine/L-proline transport ATP binding subunit, at 70,227 to 71,438 _2763 EX28DRAFT_2764: EX28DRAFT_2764 - ABC-type proline/glycine betaine transport system, permease component, at 71,422 to 72,492 _2764 Position (kb) 70 71 72Strain fitness (log2 ratio) -1 0 1at 69.248 kb on + strand, within EX28DRAFT_2762at 69.357 kb on - strand, within EX28DRAFT_2762at 69.446 kb on + strand, within EX28DRAFT_2762at 69.447 kb on - strand, within EX28DRAFT_2762at 69.527 kb on + strand, within EX28DRAFT_2762at 69.528 kb on - strand, within EX28DRAFT_2762at 69.538 kb on + strand, within EX28DRAFT_2762at 69.539 kb on - strand, within EX28DRAFT_2762at 69.589 kb on + strand, within EX28DRAFT_2762at 69.641 kb on + strand, within EX28DRAFT_2762at 69.657 kb on - strand, within EX28DRAFT_2762at 69.735 kb on - strand, within EX28DRAFT_2762at 69.779 kb on - strand, within EX28DRAFT_2762at 69.923 kb on + strandat 69.969 kb on + strandat 70.206 kb on + strandat 70.265 kb on - strandat 70.298 kb on + strandat 70.510 kb on + strand, within EX28DRAFT_2763at 70.769 kb on + strand, within EX28DRAFT_2763at 70.780 kb on + strand, within EX28DRAFT_2763at 70.780 kb on + strand, within EX28DRAFT_2763at 70.781 kb on - strand, within EX28DRAFT_2763at 70.783 kb on + strand, within EX28DRAFT_2763at 70.917 kb on - strand, within EX28DRAFT_2763at 71.061 kb on - strand, within EX28DRAFT_2763at 71.093 kb on + strand, within EX28DRAFT_2763at 71.093 kb on + strand, within EX28DRAFT_2763at 71.361 kb on + strandat 71.596 kb on - strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.959 kb on - strand, within EX28DRAFT_2764at 72.005 kb on - strand, within EX28DRAFT_2764at 72.066 kb on + strand, within EX28DRAFT_2764at 72.067 kb on - strand, within EX28DRAFT_2764at 72.067 kb on - strand, within EX28DRAFT_2764

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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69,248 + EX28DRAFT_2762 0.33 -0.3
69,357 - EX28DRAFT_2762 0.44 +0.3
69,446 + EX28DRAFT_2762 0.53 +0.4
69,447 - EX28DRAFT_2762 0.53 +0.8
69,527 + EX28DRAFT_2762 0.62 +1.7
69,528 - EX28DRAFT_2762 0.62 +0.5
69,538 + EX28DRAFT_2762 0.63 -1.0
69,539 - EX28DRAFT_2762 0.63 +0.3
69,589 + EX28DRAFT_2762 0.68 -0.1
69,641 + EX28DRAFT_2762 0.73 +0.1
69,657 - EX28DRAFT_2762 0.75 -0.0
69,735 - EX28DRAFT_2762 0.83 -0.3
69,779 - EX28DRAFT_2762 0.88 +0.1
69,923 + -0.3
69,969 + -0.4
70,206 + +0.3
70,265 - -0.4
70,298 + -0.1
70,510 + EX28DRAFT_2763 0.23 +0.1
70,769 + EX28DRAFT_2763 0.45 -0.1
70,780 + EX28DRAFT_2763 0.46 +1.0
70,780 + EX28DRAFT_2763 0.46 -0.1
70,781 - EX28DRAFT_2763 0.46 +0.2
70,783 + EX28DRAFT_2763 0.46 -0.3
70,917 - EX28DRAFT_2763 0.57 +0.8
71,061 - EX28DRAFT_2763 0.69 -0.0
71,093 + EX28DRAFT_2763 0.71 +0.2
71,093 + EX28DRAFT_2763 0.71 +0.4
71,361 + +0.4
71,596 - EX28DRAFT_2764 0.16 -0.6
71,695 + EX28DRAFT_2764 0.25 +1.2
71,695 + EX28DRAFT_2764 0.25 -0.0
71,695 + EX28DRAFT_2764 0.25 -0.1
71,695 + EX28DRAFT_2764 0.25 +1.2
71,959 - EX28DRAFT_2764 0.50 -0.3
72,005 - EX28DRAFT_2764 0.54 -0.1
72,066 + EX28DRAFT_2764 0.60 +0.5
72,067 - EX28DRAFT_2764 0.60 +0.3
72,067 - EX28DRAFT_2764 0.60 +0.9

Or see this region's nucleotide sequence