Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2761 and EX28DRAFT_2762 are separated by 9 nucleotides EX28DRAFT_2762 and EX28DRAFT_2763 are separated by 331 nucleotides
EX28DRAFT_2761: EX28DRAFT_2761 - ribonucleoside-diphosphate reductase, alpha subunit, at 66,782 to 68,926
_2761
EX28DRAFT_2762: EX28DRAFT_2762 - ribonucleoside-diphosphate reductase, class 1b, beta subunit, at 68,936 to 69,895
_2762
EX28DRAFT_2763: EX28DRAFT_2763 - glycine betaine/L-proline transport ATP binding subunit, at 70,227 to 71,438
_2763
Position (kb)
68
69
70 Strain fitness (log2 ratio)
-1
0
1 at 67.997 kb on + strand, within EX28DRAFT_2761 at 68.017 kb on + strand, within EX28DRAFT_2761 at 68.149 kb on + strand, within EX28DRAFT_2761 at 68.271 kb on - strand, within EX28DRAFT_2761 at 68.516 kb on + strand, within EX28DRAFT_2761 at 68.517 kb on - strand, within EX28DRAFT_2761 at 68.517 kb on - strand, within EX28DRAFT_2761 at 68.561 kb on + strand, within EX28DRAFT_2761 at 68.646 kb on - strand, within EX28DRAFT_2761 at 68.696 kb on + strand, within EX28DRAFT_2761 at 68.697 kb on - strand, within EX28DRAFT_2761 at 68.697 kb on - strand, within EX28DRAFT_2761 at 68.697 kb on - strand, within EX28DRAFT_2761 at 68.826 kb on - strand at 68.855 kb on + strand at 68.856 kb on - strand at 68.856 kb on - strand at 69.248 kb on + strand, within EX28DRAFT_2762 at 69.357 kb on - strand, within EX28DRAFT_2762 at 69.446 kb on + strand, within EX28DRAFT_2762 at 69.447 kb on - strand, within EX28DRAFT_2762 at 69.527 kb on + strand, within EX28DRAFT_2762 at 69.528 kb on - strand, within EX28DRAFT_2762 at 69.538 kb on + strand, within EX28DRAFT_2762 at 69.539 kb on - strand, within EX28DRAFT_2762 at 69.589 kb on + strand, within EX28DRAFT_2762 at 69.641 kb on + strand, within EX28DRAFT_2762 at 69.657 kb on - strand, within EX28DRAFT_2762 at 69.735 kb on - strand, within EX28DRAFT_2762 at 69.779 kb on - strand, within EX28DRAFT_2762 at 69.923 kb on + strand at 69.969 kb on + strand at 70.206 kb on + strand at 70.265 kb on - strand at 70.298 kb on + strand at 70.510 kb on + strand, within EX28DRAFT_2763 at 70.769 kb on + strand, within EX28DRAFT_2763 at 70.780 kb on + strand, within EX28DRAFT_2763 at 70.780 kb on + strand, within EX28DRAFT_2763 at 70.781 kb on - strand, within EX28DRAFT_2763 at 70.783 kb on + strand, within EX28DRAFT_2763
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 67,997 + EX28DRAFT_2761 0.57 +0.0 68,017 + EX28DRAFT_2761 0.58 -0.1 68,149 + EX28DRAFT_2761 0.64 -0.5 68,271 - EX28DRAFT_2761 0.69 +0.4 68,516 + EX28DRAFT_2761 0.81 +0.5 68,517 - EX28DRAFT_2761 0.81 -0.4 68,517 - EX28DRAFT_2761 0.81 +0.1 68,561 + EX28DRAFT_2761 0.83 +0.1 68,646 - EX28DRAFT_2761 0.87 -0.4 68,696 + EX28DRAFT_2761 0.89 +0.6 68,697 - EX28DRAFT_2761 0.89 +0.2 68,697 - EX28DRAFT_2761 0.89 -0.1 68,697 - EX28DRAFT_2761 0.89 +0.5 68,826 - +0.0 68,855 + +0.0 68,856 - +0.4 68,856 - +0.2 69,248 + EX28DRAFT_2762 0.33 -0.3 69,357 - EX28DRAFT_2762 0.44 +0.3 69,446 + EX28DRAFT_2762 0.53 +0.4 69,447 - EX28DRAFT_2762 0.53 +0.8 69,527 + EX28DRAFT_2762 0.62 +1.7 69,528 - EX28DRAFT_2762 0.62 +0.5 69,538 + EX28DRAFT_2762 0.63 -1.0 69,539 - EX28DRAFT_2762 0.63 +0.3 69,589 + EX28DRAFT_2762 0.68 -0.1 69,641 + EX28DRAFT_2762 0.73 +0.1 69,657 - EX28DRAFT_2762 0.75 -0.0 69,735 - EX28DRAFT_2762 0.83 -0.3 69,779 - EX28DRAFT_2762 0.88 +0.1 69,923 + -0.3 69,969 + -0.4 70,206 + +0.3 70,265 - -0.4 70,298 + -0.1 70,510 + EX28DRAFT_2763 0.23 +0.1 70,769 + EX28DRAFT_2763 0.45 -0.1 70,780 + EX28DRAFT_2763 0.46 +1.0 70,780 + EX28DRAFT_2763 0.46 -0.1 70,781 - EX28DRAFT_2763 0.46 +0.2 70,783 + EX28DRAFT_2763 0.46 -0.3
Or see this region's nucleotide sequence