Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2674 and EX28DRAFT_2675 overlap by 4 nucleotides EX28DRAFT_2675 and EX28DRAFT_2676 overlap by 4 nucleotides EX28DRAFT_2676 and EX28DRAFT_2677 are separated by 82 nucleotides
EX28DRAFT_2674: EX28DRAFT_2674 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 2,713,184 to 2,714,266
_2674
EX28DRAFT_2675: EX28DRAFT_2675 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 2,714,263 to 2,715,276
_2675
EX28DRAFT_2676: EX28DRAFT_2676 - Transcriptional regulators, at 2,715,273 to 2,715,992
_2676
EX28DRAFT_2677: EX28DRAFT_2677 - hypothetical protein, at 2,716,075 to 2,716,347
_2677
Position (kb)
2714
2715
2716 Strain fitness (log2 ratio)
-1
0
1 at 2713.279 kb on + strand at 2713.518 kb on + strand, within EX28DRAFT_2674 at 2713.519 kb on - strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2713.581 kb on + strand, within EX28DRAFT_2674 at 2714.102 kb on - strand, within EX28DRAFT_2674 at 2714.102 kb on - strand, within EX28DRAFT_2674 at 2714.510 kb on + strand, within EX28DRAFT_2675 at 2714.573 kb on + strand, within EX28DRAFT_2675 at 2714.573 kb on + strand, within EX28DRAFT_2675 at 2714.574 kb on - strand, within EX28DRAFT_2675 at 2714.614 kb on + strand, within EX28DRAFT_2675 at 2714.614 kb on + strand, within EX28DRAFT_2675 at 2714.614 kb on + strand, within EX28DRAFT_2675 at 2715.008 kb on + strand, within EX28DRAFT_2675 at 2715.181 kb on - strand at 2715.259 kb on - strand at 2715.265 kb on + strand at 2715.398 kb on + strand, within EX28DRAFT_2676 at 2715.398 kb on + strand, within EX28DRAFT_2676 at 2715.398 kb on + strand, within EX28DRAFT_2676 at 2715.399 kb on - strand, within EX28DRAFT_2676 at 2715.399 kb on - strand, within EX28DRAFT_2676 at 2715.445 kb on - strand, within EX28DRAFT_2676 at 2715.775 kb on - strand, within EX28DRAFT_2676 at 2715.776 kb on + strand, within EX28DRAFT_2676 at 2715.930 kb on - strand at 2716.262 kb on - strand, within EX28DRAFT_2677
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,713,279 + +0.5 2,713,518 + EX28DRAFT_2674 0.31 +0.9 2,713,519 - EX28DRAFT_2674 0.31 -0.1 2,713,581 + EX28DRAFT_2674 0.37 +0.0 2,713,581 + EX28DRAFT_2674 0.37 -0.1 2,713,581 + EX28DRAFT_2674 0.37 -1.0 2,713,581 + EX28DRAFT_2674 0.37 +0.6 2,714,102 - EX28DRAFT_2674 0.85 +1.1 2,714,102 - EX28DRAFT_2674 0.85 +0.3 2,714,510 + EX28DRAFT_2675 0.24 -0.3 2,714,573 + EX28DRAFT_2675 0.31 +0.1 2,714,573 + EX28DRAFT_2675 0.31 +0.5 2,714,574 - EX28DRAFT_2675 0.31 +1.6 2,714,614 + EX28DRAFT_2675 0.35 +0.2 2,714,614 + EX28DRAFT_2675 0.35 -0.1 2,714,614 + EX28DRAFT_2675 0.35 -0.2 2,715,008 + EX28DRAFT_2675 0.73 -0.5 2,715,181 - +0.4 2,715,259 - +0.7 2,715,265 + +0.3 2,715,398 + EX28DRAFT_2676 0.17 +0.1 2,715,398 + EX28DRAFT_2676 0.17 +0.9 2,715,398 + EX28DRAFT_2676 0.17 -0.1 2,715,399 - EX28DRAFT_2676 0.17 -0.1 2,715,399 - EX28DRAFT_2676 0.17 +0.4 2,715,445 - EX28DRAFT_2676 0.24 -0.3 2,715,775 - EX28DRAFT_2676 0.70 -0.6 2,715,776 + EX28DRAFT_2676 0.70 -0.5 2,715,930 - -0.4 2,716,262 - EX28DRAFT_2677 0.68 -0.0
Or see this region's nucleotide sequence