Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2670 and EX28DRAFT_2671 are separated by 9 nucleotides EX28DRAFT_2671 and EX28DRAFT_2672 are separated by 2 nucleotides EX28DRAFT_2672 and EX28DRAFT_2673 are separated by 18 nucleotides
EX28DRAFT_2670: EX28DRAFT_2670 - Gamma-glutamyltransferase, at 2,708,218 to 2,709,819
_2670
EX28DRAFT_2671: EX28DRAFT_2671 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 2,709,829 to 2,710,704
_2671
EX28DRAFT_2672: EX28DRAFT_2672 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 2,710,707 to 2,711,648
_2672
EX28DRAFT_2673: EX28DRAFT_2673 - ABC-type dipeptide transport system, periplasmic component, at 2,711,667 to 2,713,181
_2673
Position (kb)
2710
2711
2712 Strain fitness (log2 ratio)
-1
0
1 at 2709.874 kb on + strand at 2709.879 kb on + strand at 2710.104 kb on + strand, within EX28DRAFT_2671 at 2710.104 kb on + strand, within EX28DRAFT_2671 at 2710.104 kb on + strand, within EX28DRAFT_2671 at 2710.104 kb on + strand, within EX28DRAFT_2671 at 2710.105 kb on - strand, within EX28DRAFT_2671 at 2710.105 kb on - strand, within EX28DRAFT_2671 at 2710.105 kb on - strand, within EX28DRAFT_2671 at 2710.105 kb on - strand, within EX28DRAFT_2671 at 2710.105 kb on - strand, within EX28DRAFT_2671 at 2710.154 kb on + strand, within EX28DRAFT_2671 at 2710.154 kb on + strand, within EX28DRAFT_2671 at 2710.154 kb on + strand, within EX28DRAFT_2671 at 2710.155 kb on - strand, within EX28DRAFT_2671 at 2710.155 kb on - strand, within EX28DRAFT_2671 at 2710.411 kb on - strand, within EX28DRAFT_2671 at 2710.411 kb on - strand, within EX28DRAFT_2671 at 2710.411 kb on - strand, within EX28DRAFT_2671 at 2710.447 kb on - strand, within EX28DRAFT_2671 at 2710.493 kb on + strand, within EX28DRAFT_2671 at 2710.494 kb on - strand, within EX28DRAFT_2671 at 2710.494 kb on - strand, within EX28DRAFT_2671 at 2710.738 kb on + strand at 2710.994 kb on + strand, within EX28DRAFT_2672 at 2711.014 kb on + strand, within EX28DRAFT_2672 at 2711.014 kb on + strand, within EX28DRAFT_2672 at 2711.015 kb on - strand, within EX28DRAFT_2672 at 2711.328 kb on - strand, within EX28DRAFT_2672 at 2711.455 kb on + strand, within EX28DRAFT_2672 at 2711.668 kb on + strand at 2711.669 kb on - strand at 2711.669 kb on - strand at 2711.768 kb on - strand at 2711.773 kb on + strand at 2711.927 kb on + strand, within EX28DRAFT_2673 at 2711.927 kb on + strand, within EX28DRAFT_2673 at 2711.928 kb on - strand, within EX28DRAFT_2673 at 2712.082 kb on - strand, within EX28DRAFT_2673 at 2712.256 kb on + strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.257 kb on - strand, within EX28DRAFT_2673 at 2712.535 kb on + strand, within EX28DRAFT_2673 at 2712.535 kb on + strand, within EX28DRAFT_2673 at 2712.536 kb on - strand, within EX28DRAFT_2673
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,709,874 + +1.6 2,709,879 + +0.6 2,710,104 + EX28DRAFT_2671 0.31 +0.0 2,710,104 + EX28DRAFT_2671 0.31 +0.6 2,710,104 + EX28DRAFT_2671 0.31 +0.6 2,710,104 + EX28DRAFT_2671 0.31 +0.3 2,710,105 - EX28DRAFT_2671 0.32 -1.4 2,710,105 - EX28DRAFT_2671 0.32 -0.2 2,710,105 - EX28DRAFT_2671 0.32 -0.0 2,710,105 - EX28DRAFT_2671 0.32 -0.2 2,710,105 - EX28DRAFT_2671 0.32 -0.4 2,710,154 + EX28DRAFT_2671 0.37 -0.0 2,710,154 + EX28DRAFT_2671 0.37 +0.5 2,710,154 + EX28DRAFT_2671 0.37 +0.1 2,710,155 - EX28DRAFT_2671 0.37 -0.6 2,710,155 - EX28DRAFT_2671 0.37 -0.1 2,710,411 - EX28DRAFT_2671 0.66 +0.3 2,710,411 - EX28DRAFT_2671 0.66 -0.2 2,710,411 - EX28DRAFT_2671 0.66 -0.8 2,710,447 - EX28DRAFT_2671 0.71 -1.5 2,710,493 + EX28DRAFT_2671 0.76 +0.4 2,710,494 - EX28DRAFT_2671 0.76 -1.1 2,710,494 - EX28DRAFT_2671 0.76 +0.7 2,710,738 + +0.1 2,710,994 + EX28DRAFT_2672 0.30 -0.0 2,711,014 + EX28DRAFT_2672 0.33 +0.3 2,711,014 + EX28DRAFT_2672 0.33 +0.3 2,711,015 - EX28DRAFT_2672 0.33 -1.4 2,711,328 - EX28DRAFT_2672 0.66 -0.1 2,711,455 + EX28DRAFT_2672 0.79 -0.4 2,711,668 + -0.2 2,711,669 - -0.2 2,711,669 - +0.1 2,711,768 - -0.5 2,711,773 + -0.4 2,711,927 + EX28DRAFT_2673 0.17 -0.5 2,711,927 + EX28DRAFT_2673 0.17 +0.3 2,711,928 - EX28DRAFT_2673 0.17 -0.1 2,712,082 - EX28DRAFT_2673 0.27 +0.7 2,712,256 + EX28DRAFT_2673 0.39 +0.1 2,712,257 - EX28DRAFT_2673 0.39 +0.2 2,712,257 - EX28DRAFT_2673 0.39 +0.2 2,712,257 - EX28DRAFT_2673 0.39 -0.3 2,712,257 - EX28DRAFT_2673 0.39 +0.1 2,712,535 + EX28DRAFT_2673 0.57 -0.0 2,712,535 + EX28DRAFT_2673 0.57 +0.2 2,712,536 - EX28DRAFT_2673 0.57 +0.0
Or see this region's nucleotide sequence