Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2615 and EX28DRAFT_2616 are separated by 50 nucleotides EX28DRAFT_2616 and EX28DRAFT_2617 are separated by 99 nucleotides EX28DRAFT_2617 and EX28DRAFT_2618 are separated by 665 nucleotides
EX28DRAFT_2615: EX28DRAFT_2615 - drug resistance transporter, EmrB/QacA subfamily, at 2,653,197 to 2,654,741
_2615
EX28DRAFT_2616: EX28DRAFT_2616 - hypothetical protein, at 2,654,792 to 2,655,088
_2616
EX28DRAFT_2617: EX28DRAFT_2617 - Ion channel, at 2,655,188 to 2,655,883
_2617
EX28DRAFT_2618: EX28DRAFT_2618 - Uncharacterized protein conserved in bacteria, at 2,656,549 to 2,657,043
_2618
Position (kb)
2655
2656 Strain fitness (log2 ratio)
-1
0
1 at 2654.190 kb on - strand, within EX28DRAFT_2615 at 2654.219 kb on - strand, within EX28DRAFT_2615 at 2654.222 kb on + strand, within EX28DRAFT_2615 at 2654.222 kb on + strand, within EX28DRAFT_2615 at 2654.308 kb on + strand, within EX28DRAFT_2615 at 2654.343 kb on + strand, within EX28DRAFT_2615 at 2654.343 kb on + strand, within EX28DRAFT_2615 at 2654.344 kb on - strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.347 kb on - strand, within EX28DRAFT_2615 at 2654.380 kb on + strand, within EX28DRAFT_2615 at 2654.380 kb on + strand, within EX28DRAFT_2615 at 2654.381 kb on - strand, within EX28DRAFT_2615 at 2654.489 kb on + strand, within EX28DRAFT_2615 at 2654.490 kb on - strand, within EX28DRAFT_2615 at 2654.491 kb on + strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.526 kb on - strand, within EX28DRAFT_2615 at 2654.549 kb on + strand, within EX28DRAFT_2615 at 2654.606 kb on - strand at 2654.807 kb on + strand at 2655.235 kb on + strand at 2655.595 kb on + strand, within EX28DRAFT_2617 at 2655.607 kb on + strand, within EX28DRAFT_2617 at 2655.667 kb on + strand, within EX28DRAFT_2617 at 2655.759 kb on + strand, within EX28DRAFT_2617 at 2655.775 kb on + strand, within EX28DRAFT_2617 at 2655.813 kb on - strand, within EX28DRAFT_2617 at 2655.851 kb on - strand at 2655.912 kb on + strand at 2655.913 kb on - strand at 2655.981 kb on - strand at 2656.294 kb on + strand at 2656.303 kb on + strand at 2656.487 kb on + strand at 2656.572 kb on - strand at 2656.747 kb on + strand, within EX28DRAFT_2618 at 2656.818 kb on + strand, within EX28DRAFT_2618 at 2656.818 kb on + strand, within EX28DRAFT_2618 at 2656.819 kb on - strand, within EX28DRAFT_2618 at 2656.819 kb on - strand, within EX28DRAFT_2618 at 2656.875 kb on + strand, within EX28DRAFT_2618
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,654,190 - EX28DRAFT_2615 0.64 +0.2 2,654,219 - EX28DRAFT_2615 0.66 -0.9 2,654,222 + EX28DRAFT_2615 0.66 -0.2 2,654,222 + EX28DRAFT_2615 0.66 -0.3 2,654,308 + EX28DRAFT_2615 0.72 +1.0 2,654,343 + EX28DRAFT_2615 0.74 +0.0 2,654,343 + EX28DRAFT_2615 0.74 +0.1 2,654,344 - EX28DRAFT_2615 0.74 +0.4 2,654,346 + EX28DRAFT_2615 0.74 +0.6 2,654,346 + EX28DRAFT_2615 0.74 +0.6 2,654,346 + EX28DRAFT_2615 0.74 -0.6 2,654,346 + EX28DRAFT_2615 0.74 -0.0 2,654,347 - EX28DRAFT_2615 0.74 -0.6 2,654,380 + EX28DRAFT_2615 0.77 +1.0 2,654,380 + EX28DRAFT_2615 0.77 -0.1 2,654,381 - EX28DRAFT_2615 0.77 +0.9 2,654,489 + EX28DRAFT_2615 0.84 -0.6 2,654,490 - EX28DRAFT_2615 0.84 -0.3 2,654,491 + EX28DRAFT_2615 0.84 +0.2 2,654,492 - EX28DRAFT_2615 0.84 -1.2 2,654,492 - EX28DRAFT_2615 0.84 +0.5 2,654,492 - EX28DRAFT_2615 0.84 -0.3 2,654,492 - EX28DRAFT_2615 0.84 -0.1 2,654,492 - EX28DRAFT_2615 0.84 -0.6 2,654,492 - EX28DRAFT_2615 0.84 +0.0 2,654,526 - EX28DRAFT_2615 0.86 +0.3 2,654,549 + EX28DRAFT_2615 0.88 +0.2 2,654,606 - -0.1 2,654,807 + -0.0 2,655,235 + -0.7 2,655,595 + EX28DRAFT_2617 0.58 -0.2 2,655,607 + EX28DRAFT_2617 0.60 +0.1 2,655,667 + EX28DRAFT_2617 0.69 -0.1 2,655,759 + EX28DRAFT_2617 0.82 -1.0 2,655,775 + EX28DRAFT_2617 0.84 -0.7 2,655,813 - EX28DRAFT_2617 0.90 -0.1 2,655,851 - +0.4 2,655,912 + +1.1 2,655,913 - -0.8 2,655,981 - -0.4 2,656,294 + -0.4 2,656,303 + -0.8 2,656,487 + -0.3 2,656,572 - -0.8 2,656,747 + EX28DRAFT_2618 0.40 -0.1 2,656,818 + EX28DRAFT_2618 0.54 -0.5 2,656,818 + EX28DRAFT_2618 0.54 -0.0 2,656,819 - EX28DRAFT_2618 0.55 -0.0 2,656,819 - EX28DRAFT_2618 0.55 +0.1 2,656,875 + EX28DRAFT_2618 0.66 +0.5
Or see this region's nucleotide sequence