Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2536 and EX28DRAFT_2537 are separated by 308 nucleotides EX28DRAFT_2537 and EX28DRAFT_2538 are separated by 46 nucleotides EX28DRAFT_2538 and EX28DRAFT_2539 are separated by 477 nucleotides
EX28DRAFT_2536: EX28DRAFT_2536 - Stress-induced morphogen (activity unknown), at 2,568,431 to 2,568,745
_2536
EX28DRAFT_2537: EX28DRAFT_2537 - Uncharacterized lipoprotein, at 2,569,054 to 2,569,632
_2537
EX28DRAFT_2538: EX28DRAFT_2538 - AmpG-like permease, at 2,569,679 to 2,571,154
_2538
EX28DRAFT_2539: EX28DRAFT_2539 - cytochrome o ubiquinol oxidase subunit II, at 2,571,632 to 2,572,579
_2539
Position (kb)
2569
2570
2571
2572 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2568.695 kb on + strand, within EX28DRAFT_2536 at 2568.696 kb on - strand, within EX28DRAFT_2536 at 2568.717 kb on - strand at 2568.728 kb on + strand at 2568.728 kb on + strand at 2568.728 kb on + strand at 2568.728 kb on + strand at 2568.729 kb on - strand at 2568.729 kb on - strand at 2568.730 kb on + strand at 2568.730 kb on + strand at 2568.731 kb on - strand at 2568.731 kb on - strand at 2568.731 kb on - strand at 2568.740 kb on + strand at 2568.741 kb on - strand at 2568.906 kb on + strand at 2568.961 kb on + strand at 2568.999 kb on + strand at 2569.000 kb on - strand at 2569.023 kb on + strand at 2569.024 kb on - strand at 2569.024 kb on - strand at 2569.025 kb on + strand at 2569.025 kb on + strand at 2569.025 kb on + strand at 2569.031 kb on + strand at 2569.498 kb on + strand, within EX28DRAFT_2537 at 2569.499 kb on - strand, within EX28DRAFT_2537 at 2569.499 kb on - strand, within EX28DRAFT_2537 at 2569.581 kb on + strand at 2569.654 kb on - strand at 2569.654 kb on - strand at 2569.654 kb on - strand at 2569.691 kb on + strand at 2569.691 kb on + strand at 2569.692 kb on - strand at 2569.692 kb on - strand at 2569.692 kb on - strand at 2569.695 kb on + strand at 2569.854 kb on - strand, within EX28DRAFT_2538 at 2569.861 kb on + strand, within EX28DRAFT_2538 at 2569.892 kb on + strand, within EX28DRAFT_2538 at 2569.893 kb on - strand, within EX28DRAFT_2538 at 2570.186 kb on + strand, within EX28DRAFT_2538 at 2570.207 kb on + strand, within EX28DRAFT_2538 at 2570.208 kb on - strand, within EX28DRAFT_2538 at 2570.208 kb on - strand, within EX28DRAFT_2538 at 2570.208 kb on - strand, within EX28DRAFT_2538 at 2570.378 kb on + strand, within EX28DRAFT_2538 at 2570.379 kb on - strand, within EX28DRAFT_2538 at 2570.379 kb on - strand, within EX28DRAFT_2538 at 2570.380 kb on + strand, within EX28DRAFT_2538 at 2570.380 kb on + strand, within EX28DRAFT_2538 at 2570.381 kb on - strand, within EX28DRAFT_2538 at 2570.471 kb on - strand, within EX28DRAFT_2538 at 2570.511 kb on - strand, within EX28DRAFT_2538 at 2570.624 kb on - strand, within EX28DRAFT_2538 at 2570.624 kb on - strand, within EX28DRAFT_2538 at 2570.900 kb on + strand, within EX28DRAFT_2538 at 2570.923 kb on + strand, within EX28DRAFT_2538 at 2571.017 kb on - strand at 2571.020 kb on - strand at 2571.043 kb on - strand at 2571.445 kb on - strand at 2571.446 kb on + strand at 2571.486 kb on + strand at 2571.487 kb on - strand at 2571.691 kb on - strand at 2571.863 kb on + strand, within EX28DRAFT_2539 at 2571.863 kb on + strand, within EX28DRAFT_2539 at 2571.864 kb on - strand, within EX28DRAFT_2539 at 2571.866 kb on - strand, within EX28DRAFT_2539 at 2571.920 kb on - strand, within EX28DRAFT_2539 at 2572.012 kb on + strand, within EX28DRAFT_2539
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,568,695 + EX28DRAFT_2536 0.84 -1.0 2,568,696 - EX28DRAFT_2536 0.84 +0.3 2,568,717 - -0.1 2,568,728 + -1.5 2,568,728 + -3.2 2,568,728 + -0.4 2,568,728 + -0.3 2,568,729 - +0.1 2,568,729 - +0.2 2,568,730 + -0.8 2,568,730 + -0.7 2,568,731 - +0.4 2,568,731 - -0.2 2,568,731 - -0.2 2,568,740 + -0.1 2,568,741 - -1.0 2,568,906 + +0.3 2,568,961 + -0.4 2,568,999 + -1.4 2,569,000 - -0.5 2,569,023 + -0.6 2,569,024 - +1.0 2,569,024 - -0.6 2,569,025 + -0.6 2,569,025 + -2.0 2,569,025 + -0.1 2,569,031 + +0.1 2,569,498 + EX28DRAFT_2537 0.77 -0.2 2,569,499 - EX28DRAFT_2537 0.77 -0.2 2,569,499 - EX28DRAFT_2537 0.77 -0.5 2,569,581 + +0.3 2,569,654 - +0.1 2,569,654 - +0.4 2,569,654 - +0.1 2,569,691 + -0.4 2,569,691 + -0.4 2,569,692 - +1.2 2,569,692 - -0.3 2,569,692 - +0.2 2,569,695 + +0.2 2,569,854 - EX28DRAFT_2538 0.12 +0.3 2,569,861 + EX28DRAFT_2538 0.12 -2.3 2,569,892 + EX28DRAFT_2538 0.14 -0.6 2,569,893 - EX28DRAFT_2538 0.14 -0.2 2,570,186 + EX28DRAFT_2538 0.34 -0.0 2,570,207 + EX28DRAFT_2538 0.36 +0.2 2,570,208 - EX28DRAFT_2538 0.36 +0.2 2,570,208 - EX28DRAFT_2538 0.36 -0.4 2,570,208 - EX28DRAFT_2538 0.36 -0.5 2,570,378 + EX28DRAFT_2538 0.47 -0.3 2,570,379 - EX28DRAFT_2538 0.47 +0.7 2,570,379 - EX28DRAFT_2538 0.47 -0.1 2,570,380 + EX28DRAFT_2538 0.47 +0.0 2,570,380 + EX28DRAFT_2538 0.47 -1.3 2,570,381 - EX28DRAFT_2538 0.48 -0.1 2,570,471 - EX28DRAFT_2538 0.54 -0.2 2,570,511 - EX28DRAFT_2538 0.56 +0.1 2,570,624 - EX28DRAFT_2538 0.64 -0.0 2,570,624 - EX28DRAFT_2538 0.64 -0.5 2,570,900 + EX28DRAFT_2538 0.83 +1.2 2,570,923 + EX28DRAFT_2538 0.84 +1.5 2,571,017 - +2.6 2,571,020 - -0.1 2,571,043 - +0.2 2,571,445 - -0.3 2,571,446 + -0.1 2,571,486 + +0.3 2,571,487 - -1.0 2,571,691 - -0.9 2,571,863 + EX28DRAFT_2539 0.24 +0.6 2,571,863 + EX28DRAFT_2539 0.24 -0.3 2,571,864 - EX28DRAFT_2539 0.24 -1.8 2,571,866 - EX28DRAFT_2539 0.25 -2.4 2,571,920 - EX28DRAFT_2539 0.30 -0.1 2,572,012 + EX28DRAFT_2539 0.40 -0.9
Or see this region's nucleotide sequence