Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2360 and EX28DRAFT_2361 are separated by 89 nucleotides EX28DRAFT_2361 and EX28DRAFT_2362 are separated by 19 nucleotides
EX28DRAFT_2360: EX28DRAFT_2360 - Uncharacterized conserved protein, at 2,380,162 to 2,381,403
_2360
EX28DRAFT_2361: EX28DRAFT_2361 - ABC-type sugar transport system, periplasmic component, at 2,381,493 to 2,382,557
_2361
EX28DRAFT_2362: EX28DRAFT_2362 - Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components, at 2,382,577 to 2,383,572
_2362
Position (kb)
2381
2382
2383 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2380.895 kb on + strand, within EX28DRAFT_2360 at 2380.896 kb on - strand, within EX28DRAFT_2360 at 2380.929 kb on - strand, within EX28DRAFT_2360 at 2381.023 kb on - strand, within EX28DRAFT_2360 at 2381.096 kb on + strand, within EX28DRAFT_2360 at 2381.096 kb on + strand, within EX28DRAFT_2360 at 2381.097 kb on - strand, within EX28DRAFT_2360 at 2381.292 kb on - strand at 2381.408 kb on - strand at 2381.495 kb on - strand at 2381.495 kb on - strand at 2381.495 kb on - strand at 2382.017 kb on - strand, within EX28DRAFT_2361 at 2382.266 kb on + strand, within EX28DRAFT_2361 at 2382.277 kb on + strand, within EX28DRAFT_2361 at 2382.277 kb on + strand, within EX28DRAFT_2361 at 2382.393 kb on - strand, within EX28DRAFT_2361 at 2382.590 kb on - strand at 2382.590 kb on - strand at 2382.593 kb on + strand at 2382.631 kb on + strand at 2382.631 kb on + strand at 2382.632 kb on - strand at 2382.632 kb on - strand at 2382.634 kb on - strand at 2382.634 kb on - strand at 2382.647 kb on + strand at 2382.648 kb on - strand at 2382.947 kb on + strand, within EX28DRAFT_2362 at 2382.947 kb on + strand, within EX28DRAFT_2362 at 2383.062 kb on + strand, within EX28DRAFT_2362 at 2383.127 kb on + strand, within EX28DRAFT_2362 at 2383.127 kb on + strand, within EX28DRAFT_2362 at 2383.188 kb on + strand, within EX28DRAFT_2362 at 2383.216 kb on - strand, within EX28DRAFT_2362 at 2383.381 kb on - strand, within EX28DRAFT_2362 at 2383.509 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,380,895 + EX28DRAFT_2360 0.59 -0.6 2,380,896 - EX28DRAFT_2360 0.59 +0.1 2,380,929 - EX28DRAFT_2360 0.62 +2.3 2,381,023 - EX28DRAFT_2360 0.69 -0.4 2,381,096 + EX28DRAFT_2360 0.75 +0.6 2,381,096 + EX28DRAFT_2360 0.75 -0.2 2,381,097 - EX28DRAFT_2360 0.75 -2.2 2,381,292 - +0.4 2,381,408 - -0.1 2,381,495 - -0.1 2,381,495 - +0.3 2,381,495 - +0.5 2,382,017 - EX28DRAFT_2361 0.49 -0.2 2,382,266 + EX28DRAFT_2361 0.73 -0.4 2,382,277 + EX28DRAFT_2361 0.74 -0.6 2,382,277 + EX28DRAFT_2361 0.74 -1.8 2,382,393 - EX28DRAFT_2361 0.85 +0.3 2,382,590 - +0.3 2,382,590 - +0.4 2,382,593 + -0.2 2,382,631 + +0.5 2,382,631 + +1.5 2,382,632 - +0.3 2,382,632 - +0.3 2,382,634 - +0.6 2,382,634 - +0.1 2,382,647 + +0.7 2,382,648 - +0.3 2,382,947 + EX28DRAFT_2362 0.37 +1.8 2,382,947 + EX28DRAFT_2362 0.37 -0.1 2,383,062 + EX28DRAFT_2362 0.49 -0.2 2,383,127 + EX28DRAFT_2362 0.55 -0.8 2,383,127 + EX28DRAFT_2362 0.55 +0.2 2,383,188 + EX28DRAFT_2362 0.61 +0.0 2,383,216 - EX28DRAFT_2362 0.64 +0.0 2,383,381 - EX28DRAFT_2362 0.81 -0.6 2,383,509 - +0.8
Or see this region's nucleotide sequence