Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2335 and EX28DRAFT_2336 are separated by 81 nucleotides EX28DRAFT_2336 and EX28DRAFT_2337 are separated by 125 nucleotides EX28DRAFT_2337 and EX28DRAFT_2338 are separated by 67 nucleotides EX28DRAFT_2338 and EX28DRAFT_2339 are separated by 166 nucleotides
EX28DRAFT_2335: EX28DRAFT_2335 - lipoate synthase, at 2,360,080 to 2,361,045
_2335
EX28DRAFT_2336: EX28DRAFT_2336 - twin arginine-targeting protein translocase, TatA/E family, at 2,361,127 to 2,361,330
_2336
EX28DRAFT_2337: EX28DRAFT_2337 - Predicted amidohydrolase, at 2,361,456 to 2,362,244
_2337
EX28DRAFT_2338: EX28DRAFT_2338 - protein CrcB, at 2,362,312 to 2,362,695
_2338
EX28DRAFT_2339: EX28DRAFT_2339 - RNA, at 2,362,862 to 2,363,279
_2339
EX28DRAFT_2340: EX28DRAFT_2340 - Cold shock proteins, at 2,362,915 to 2,363,124
_2340
Position (kb)
2361
2362
2363 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2361.044 kb on - strand at 2361.051 kb on + strand at 2361.054 kb on + strand at 2361.063 kb on - strand at 2361.063 kb on - strand at 2361.067 kb on + strand at 2361.214 kb on - strand, within EX28DRAFT_2336 at 2361.316 kb on - strand at 2361.318 kb on + strand at 2361.318 kb on + strand at 2361.319 kb on - strand at 2361.319 kb on - strand at 2361.319 kb on - strand at 2361.330 kb on + strand at 2361.331 kb on - strand at 2361.347 kb on + strand at 2361.382 kb on + strand at 2361.382 kb on + strand at 2361.382 kb on + strand at 2361.383 kb on - strand at 2361.383 kb on - strand at 2361.383 kb on - strand at 2361.412 kb on + strand at 2361.413 kb on - strand at 2361.413 kb on - strand at 2361.413 kb on - strand at 2361.463 kb on - strand at 2361.538 kb on - strand, within EX28DRAFT_2337 at 2361.655 kb on + strand, within EX28DRAFT_2337 at 2361.656 kb on - strand, within EX28DRAFT_2337 at 2361.656 kb on - strand, within EX28DRAFT_2337 at 2361.656 kb on - strand, within EX28DRAFT_2337 at 2361.665 kb on + strand, within EX28DRAFT_2337 at 2361.665 kb on + strand, within EX28DRAFT_2337 at 2361.803 kb on - strand, within EX28DRAFT_2337 at 2361.803 kb on - strand, within EX28DRAFT_2337 at 2361.904 kb on + strand, within EX28DRAFT_2337 at 2361.905 kb on - strand, within EX28DRAFT_2337 at 2361.990 kb on + strand, within EX28DRAFT_2337 at 2361.991 kb on - strand, within EX28DRAFT_2337 at 2361.991 kb on - strand, within EX28DRAFT_2337 at 2361.992 kb on + strand, within EX28DRAFT_2337 at 2361.992 kb on + strand, within EX28DRAFT_2337 at 2361.993 kb on - strand, within EX28DRAFT_2337 at 2362.003 kb on - strand, within EX28DRAFT_2337 at 2362.020 kb on - strand, within EX28DRAFT_2337 at 2362.020 kb on - strand, within EX28DRAFT_2337 at 2362.104 kb on - strand, within EX28DRAFT_2337 at 2362.236 kb on + strand at 2362.236 kb on + strand at 2362.236 kb on + strand at 2362.237 kb on - strand at 2362.240 kb on + strand at 2362.240 kb on + strand at 2362.240 kb on + strand at 2362.240 kb on + strand at 2362.240 kb on + strand at 2362.241 kb on - strand at 2362.241 kb on - strand at 2362.241 kb on - strand at 2362.241 kb on - strand at 2362.241 kb on - strand at 2362.241 kb on - strand at 2362.244 kb on + strand at 2362.244 kb on + strand at 2362.244 kb on + strand at 2362.244 kb on + strand at 2362.244 kb on + strand at 2362.244 kb on + strand at 2362.244 kb on + strand at 2362.244 kb on + strand at 2362.245 kb on - strand at 2362.245 kb on - strand at 2362.245 kb on - strand at 2362.245 kb on - strand at 2362.245 kb on - strand at 2362.245 kb on - strand at 2362.245 kb on - strand at 2362.286 kb on + strand at 2362.286 kb on + strand at 2362.287 kb on - strand at 2362.287 kb on - strand at 2362.304 kb on + strand at 2362.305 kb on - strand at 2362.317 kb on - strand at 2362.317 kb on - strand at 2362.322 kb on + strand at 2362.339 kb on - strand at 2362.380 kb on + strand, within EX28DRAFT_2338 at 2362.414 kb on - strand, within EX28DRAFT_2338 at 2362.617 kb on + strand, within EX28DRAFT_2338 at 2362.629 kb on + strand, within EX28DRAFT_2338 at 2362.629 kb on + strand, within EX28DRAFT_2338 at 2362.629 kb on + strand, within EX28DRAFT_2338 at 2362.839 kb on + strand at 2362.839 kb on + strand at 2363.118 kb on + strand at 2363.138 kb on - strand at 2363.138 kb on - strand at 2363.176 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,361,044 - -1.4 2,361,051 + +0.1 2,361,054 + +2.2 2,361,063 - -0.4 2,361,063 - +0.0 2,361,067 + +0.0 2,361,214 - EX28DRAFT_2336 0.43 +0.1 2,361,316 - +0.1 2,361,318 + +0.2 2,361,318 + -0.4 2,361,319 - +1.1 2,361,319 - -0.7 2,361,319 - +0.4 2,361,330 + -0.6 2,361,331 - +0.3 2,361,347 + +0.3 2,361,382 + -0.2 2,361,382 + -0.4 2,361,382 + -0.1 2,361,383 - -0.4 2,361,383 - -0.6 2,361,383 - -0.2 2,361,412 + +0.0 2,361,413 - -0.2 2,361,413 - +1.4 2,361,413 - +0.0 2,361,463 - +1.1 2,361,538 - EX28DRAFT_2337 0.10 -0.2 2,361,655 + EX28DRAFT_2337 0.25 -0.6 2,361,656 - EX28DRAFT_2337 0.25 +1.0 2,361,656 - EX28DRAFT_2337 0.25 +1.3 2,361,656 - EX28DRAFT_2337 0.25 +0.2 2,361,665 + EX28DRAFT_2337 0.26 +0.1 2,361,665 + EX28DRAFT_2337 0.26 +0.6 2,361,803 - EX28DRAFT_2337 0.44 -0.5 2,361,803 - EX28DRAFT_2337 0.44 -3.4 2,361,904 + EX28DRAFT_2337 0.57 +0.2 2,361,905 - EX28DRAFT_2337 0.57 +1.5 2,361,990 + EX28DRAFT_2337 0.68 -0.2 2,361,991 - EX28DRAFT_2337 0.68 +0.6 2,361,991 - EX28DRAFT_2337 0.68 +0.2 2,361,992 + EX28DRAFT_2337 0.68 +0.4 2,361,992 + EX28DRAFT_2337 0.68 -0.3 2,361,993 - EX28DRAFT_2337 0.68 +0.1 2,362,003 - EX28DRAFT_2337 0.69 -0.5 2,362,020 - EX28DRAFT_2337 0.71 +0.3 2,362,020 - EX28DRAFT_2337 0.71 +2.1 2,362,104 - EX28DRAFT_2337 0.82 +0.1 2,362,236 + +0.3 2,362,236 + -0.6 2,362,236 + +0.2 2,362,237 - -0.1 2,362,240 + -0.4 2,362,240 + -0.1 2,362,240 + -0.3 2,362,240 + -0.2 2,362,240 + +1.0 2,362,241 - -0.2 2,362,241 - -0.4 2,362,241 - +0.1 2,362,241 - +0.1 2,362,241 - -0.1 2,362,241 - -0.4 2,362,244 + +0.1 2,362,244 + -0.3 2,362,244 + +0.4 2,362,244 + +0.2 2,362,244 + -0.1 2,362,244 + -0.1 2,362,244 + +0.2 2,362,244 + +0.1 2,362,245 - -0.1 2,362,245 - +0.9 2,362,245 - -0.9 2,362,245 - -0.2 2,362,245 - +0.5 2,362,245 - -0.3 2,362,245 - -0.6 2,362,286 + -0.1 2,362,286 + -0.2 2,362,287 - +0.4 2,362,287 - -1.1 2,362,304 + -0.1 2,362,305 - +0.0 2,362,317 - +0.4 2,362,317 - +0.5 2,362,322 + -0.6 2,362,339 - -0.9 2,362,380 + EX28DRAFT_2338 0.18 -0.6 2,362,414 - EX28DRAFT_2338 0.27 +0.1 2,362,617 + EX28DRAFT_2338 0.79 -0.7 2,362,629 + EX28DRAFT_2338 0.83 -0.5 2,362,629 + EX28DRAFT_2338 0.83 +0.1 2,362,629 + EX28DRAFT_2338 0.83 -0.4 2,362,839 + +0.8 2,362,839 + +1.4 2,363,118 + +0.2 2,363,138 - -0.2 2,363,138 - -0.4 2,363,176 + +0.8
Or see this region's nucleotide sequence