Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2310 and EX28DRAFT_2311 are separated by 163 nucleotides EX28DRAFT_2311 and EX28DRAFT_2312 overlap by 4 nucleotides EX28DRAFT_2312 and EX28DRAFT_2313 are separated by 44 nucleotides
EX28DRAFT_2310: EX28DRAFT_2310 - tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB, at 2,335,058 to 2,336,482
_2310
EX28DRAFT_2311: EX28DRAFT_2311 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 2,336,646 to 2,337,692
_2311
EX28DRAFT_2312: EX28DRAFT_2312 - probable rRNA maturation factor YbeY, at 2,337,689 to 2,338,156
_2312
EX28DRAFT_2313: EX28DRAFT_2313 - Putative Mg2+ and Co2+ transporter CorC, at 2,338,201 to 2,339,124
_2313
Position (kb)
2336
2337
2338 Strain fitness (log2 ratio)
-2
-1
0
1 at 2335.749 kb on + strand, within EX28DRAFT_2310 at 2335.750 kb on - strand, within EX28DRAFT_2310 at 2335.750 kb on - strand, within EX28DRAFT_2310 at 2335.750 kb on - strand, within EX28DRAFT_2310 at 2335.811 kb on + strand, within EX28DRAFT_2310 at 2335.913 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.144 kb on + strand, within EX28DRAFT_2310 at 2336.145 kb on - strand, within EX28DRAFT_2310 at 2336.160 kb on + strand, within EX28DRAFT_2310 at 2336.161 kb on + strand, within EX28DRAFT_2310 at 2336.161 kb on + strand, within EX28DRAFT_2310 at 2336.161 kb on + strand, within EX28DRAFT_2310 at 2336.162 kb on - strand, within EX28DRAFT_2310 at 2336.195 kb on - strand, within EX28DRAFT_2310 at 2336.404 kb on + strand at 2336.405 kb on - strand at 2336.481 kb on - strand at 2336.515 kb on - strand at 2336.515 kb on - strand at 2336.537 kb on - strand at 2336.653 kb on + strand at 2336.654 kb on - strand at 2336.844 kb on + strand, within EX28DRAFT_2311 at 2336.844 kb on + strand, within EX28DRAFT_2311 at 2336.852 kb on + strand, within EX28DRAFT_2311 at 2337.027 kb on + strand, within EX28DRAFT_2311 at 2337.093 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.327 kb on + strand, within EX28DRAFT_2311 at 2337.428 kb on + strand, within EX28DRAFT_2311 at 2337.635 kb on + strand at 2337.659 kb on + strand at 2338.220 kb on + strand at 2338.287 kb on + strand at 2338.404 kb on + strand, within EX28DRAFT_2313 at 2338.405 kb on - strand, within EX28DRAFT_2313 at 2338.405 kb on - strand, within EX28DRAFT_2313 at 2338.662 kb on - strand, within EX28DRAFT_2313
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,335,749 + EX28DRAFT_2310 0.48 -2.2 2,335,750 - EX28DRAFT_2310 0.49 +0.3 2,335,750 - EX28DRAFT_2310 0.49 +0.7 2,335,750 - EX28DRAFT_2310 0.49 -0.4 2,335,811 + EX28DRAFT_2310 0.53 -0.1 2,335,913 + EX28DRAFT_2310 0.60 +1.2 2,336,144 + EX28DRAFT_2310 0.76 -0.3 2,336,144 + EX28DRAFT_2310 0.76 +0.1 2,336,144 + EX28DRAFT_2310 0.76 +0.4 2,336,144 + EX28DRAFT_2310 0.76 +0.0 2,336,145 - EX28DRAFT_2310 0.76 +0.3 2,336,160 + EX28DRAFT_2310 0.77 -0.0 2,336,161 + EX28DRAFT_2310 0.77 +0.4 2,336,161 + EX28DRAFT_2310 0.77 -1.3 2,336,161 + EX28DRAFT_2310 0.77 +0.3 2,336,162 - EX28DRAFT_2310 0.77 -0.0 2,336,195 - EX28DRAFT_2310 0.80 +0.8 2,336,404 + +0.3 2,336,405 - +0.4 2,336,481 - +1.7 2,336,515 - +0.2 2,336,515 - +0.1 2,336,537 - +0.5 2,336,653 + +0.4 2,336,654 - -0.9 2,336,844 + EX28DRAFT_2311 0.19 -0.1 2,336,844 + EX28DRAFT_2311 0.19 -0.1 2,336,852 + EX28DRAFT_2311 0.20 +0.3 2,337,027 + EX28DRAFT_2311 0.36 -1.0 2,337,093 + EX28DRAFT_2311 0.43 -0.7 2,337,327 + EX28DRAFT_2311 0.65 -0.0 2,337,327 + EX28DRAFT_2311 0.65 +0.0 2,337,327 + EX28DRAFT_2311 0.65 -2.4 2,337,428 + EX28DRAFT_2311 0.75 +0.2 2,337,635 + -0.5 2,337,659 + +0.2 2,338,220 + +0.3 2,338,287 + -1.7 2,338,404 + EX28DRAFT_2313 0.22 -0.3 2,338,405 - EX28DRAFT_2313 0.22 +0.7 2,338,405 - EX28DRAFT_2313 0.22 +1.1 2,338,662 - EX28DRAFT_2313 0.50 -0.7
Or see this region's nucleotide sequence