Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2213 and EX28DRAFT_2214 overlap by 23 nucleotides EX28DRAFT_2214 and EX28DRAFT_2215 overlap by 17 nucleotides EX28DRAFT_2215 and EX28DRAFT_2216 overlap by 4 nucleotides
EX28DRAFT_2213: EX28DRAFT_2213 - dethiobiotin synthase, at 2,236,572 to 2,237,288
_2213
EX28DRAFT_2214: EX28DRAFT_2214 - malonyl-acyl carrier protein O-methyltransferase BioC, at 2,237,266 to 2,238,021
_2214
EX28DRAFT_2215: EX28DRAFT_2215 - 8-amino-7-oxononanoate synthase, at 2,238,005 to 2,239,162
_2215
EX28DRAFT_2216: EX28DRAFT_2216 - biotin synthase (EC 2.8.1.6), at 2,239,159 to 2,240,199
_2216
Position (kb)
2238
2239
2240 Strain fitness (log2 ratio)
-1
0
1 at 2237.163 kb on - strand, within EX28DRAFT_2213 at 2237.163 kb on - strand, within EX28DRAFT_2213 at 2237.260 kb on + strand at 2237.524 kb on + strand, within EX28DRAFT_2214 at 2237.963 kb on + strand at 2237.964 kb on - strand at 2237.964 kb on - strand at 2238.268 kb on + strand, within EX28DRAFT_2215 at 2238.268 kb on + strand, within EX28DRAFT_2215 at 2238.269 kb on - strand, within EX28DRAFT_2215 at 2238.269 kb on - strand, within EX28DRAFT_2215 at 2238.373 kb on - strand, within EX28DRAFT_2215 at 2238.919 kb on - strand, within EX28DRAFT_2215 at 2239.141 kb on + strand at 2239.141 kb on + strand at 2239.142 kb on - strand at 2239.344 kb on - strand, within EX28DRAFT_2216 at 2239.751 kb on + strand, within EX28DRAFT_2216 at 2239.751 kb on + strand, within EX28DRAFT_2216 at 2239.751 kb on + strand, within EX28DRAFT_2216 at 2239.752 kb on - strand, within EX28DRAFT_2216 at 2239.752 kb on - strand, within EX28DRAFT_2216 at 2239.755 kb on - strand, within EX28DRAFT_2216 at 2239.815 kb on + strand, within EX28DRAFT_2216 at 2239.816 kb on - strand, within EX28DRAFT_2216 at 2239.816 kb on - strand, within EX28DRAFT_2216 at 2239.865 kb on + strand, within EX28DRAFT_2216 at 2240.024 kb on + strand, within EX28DRAFT_2216
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,237,163 - EX28DRAFT_2213 0.82 -0.7 2,237,163 - EX28DRAFT_2213 0.82 -1.2 2,237,260 + -0.9 2,237,524 + EX28DRAFT_2214 0.34 -0.6 2,237,963 + -0.8 2,237,964 - -0.2 2,237,964 - -0.3 2,238,268 + EX28DRAFT_2215 0.23 -1.4 2,238,268 + EX28DRAFT_2215 0.23 -1.0 2,238,269 - EX28DRAFT_2215 0.23 -0.3 2,238,269 - EX28DRAFT_2215 0.23 -0.1 2,238,373 - EX28DRAFT_2215 0.32 +0.3 2,238,919 - EX28DRAFT_2215 0.79 -0.4 2,239,141 + -0.2 2,239,141 + +0.1 2,239,142 - -0.4 2,239,344 - EX28DRAFT_2216 0.18 -0.2 2,239,751 + EX28DRAFT_2216 0.57 -1.6 2,239,751 + EX28DRAFT_2216 0.57 -0.9 2,239,751 + EX28DRAFT_2216 0.57 -0.8 2,239,752 - EX28DRAFT_2216 0.57 +1.5 2,239,752 - EX28DRAFT_2216 0.57 -1.3 2,239,755 - EX28DRAFT_2216 0.57 -0.4 2,239,815 + EX28DRAFT_2216 0.63 -0.7 2,239,816 - EX28DRAFT_2216 0.63 -1.4 2,239,816 - EX28DRAFT_2216 0.63 -1.0 2,239,865 + EX28DRAFT_2216 0.68 -1.7 2,240,024 + EX28DRAFT_2216 0.83 -1.3
Or see this region's nucleotide sequence