Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2142 and EX28DRAFT_2143 are separated by 149 nucleotides EX28DRAFT_2143 and EX28DRAFT_2144 overlap by 4 nucleotides
EX28DRAFT_2142: EX28DRAFT_2142 - HAD-superfamily hydrolase, subfamily IIB, at 2,163,591 to 2,164,406
_2142
EX28DRAFT_2143: EX28DRAFT_2143 - Protein of unknown function (DUF1479), at 2,164,556 to 2,165,812
_2143
EX28DRAFT_2144: EX28DRAFT_2144 - Transcriptional regulators, at 2,165,809 to 2,166,882
_2144
Position (kb)
2164
2165
2166 Strain fitness (log2 ratio)
-2
-1
0
1 at 2163.591 kb on - strand at 2163.591 kb on - strand at 2163.735 kb on + strand, within EX28DRAFT_2142 at 2163.735 kb on + strand, within EX28DRAFT_2142 at 2163.735 kb on + strand, within EX28DRAFT_2142 at 2163.979 kb on - strand, within EX28DRAFT_2142 at 2164.032 kb on - strand, within EX28DRAFT_2142 at 2164.032 kb on - strand, within EX28DRAFT_2142 at 2164.555 kb on + strand at 2164.556 kb on - strand at 2164.612 kb on - strand at 2164.661 kb on - strand at 2164.708 kb on + strand, within EX28DRAFT_2143 at 2164.768 kb on + strand, within EX28DRAFT_2143 at 2164.772 kb on - strand, within EX28DRAFT_2143 at 2164.905 kb on - strand, within EX28DRAFT_2143 at 2164.970 kb on + strand, within EX28DRAFT_2143 at 2165.100 kb on - strand, within EX28DRAFT_2143 at 2165.199 kb on - strand, within EX28DRAFT_2143 at 2165.244 kb on - strand, within EX28DRAFT_2143 at 2165.286 kb on - strand, within EX28DRAFT_2143 at 2165.286 kb on - strand, within EX28DRAFT_2143 at 2165.382 kb on + strand, within EX28DRAFT_2143 at 2165.382 kb on + strand, within EX28DRAFT_2143 at 2165.408 kb on + strand, within EX28DRAFT_2143 at 2165.409 kb on - strand, within EX28DRAFT_2143 at 2165.409 kb on - strand, within EX28DRAFT_2143 at 2165.630 kb on + strand, within EX28DRAFT_2143 at 2165.631 kb on - strand, within EX28DRAFT_2143 at 2165.631 kb on - strand, within EX28DRAFT_2143 at 2165.631 kb on - strand, within EX28DRAFT_2143 at 2165.736 kb on - strand at 2165.810 kb on + strand at 2165.810 kb on + strand at 2165.819 kb on + strand at 2165.820 kb on - strand at 2165.863 kb on + strand at 2165.955 kb on + strand, within EX28DRAFT_2144 at 2165.957 kb on + strand, within EX28DRAFT_2144 at 2165.957 kb on + strand, within EX28DRAFT_2144 at 2165.957 kb on + strand, within EX28DRAFT_2144 at 2166.148 kb on + strand, within EX28DRAFT_2144 at 2166.439 kb on - strand, within EX28DRAFT_2144 at 2166.439 kb on - strand, within EX28DRAFT_2144 at 2166.705 kb on + strand, within EX28DRAFT_2144 at 2166.705 kb on + strand, within EX28DRAFT_2144
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,163,591 - +0.9 2,163,591 - +0.8 2,163,735 + EX28DRAFT_2142 0.18 -0.0 2,163,735 + EX28DRAFT_2142 0.18 +0.6 2,163,735 + EX28DRAFT_2142 0.18 -0.6 2,163,979 - EX28DRAFT_2142 0.48 -0.2 2,164,032 - EX28DRAFT_2142 0.54 -1.5 2,164,032 - EX28DRAFT_2142 0.54 -0.2 2,164,555 + +0.2 2,164,556 - +0.1 2,164,612 - -1.0 2,164,661 - -0.2 2,164,708 + EX28DRAFT_2143 0.12 -0.2 2,164,768 + EX28DRAFT_2143 0.17 +0.1 2,164,772 - EX28DRAFT_2143 0.17 +0.1 2,164,905 - EX28DRAFT_2143 0.28 -0.2 2,164,970 + EX28DRAFT_2143 0.33 +0.1 2,165,100 - EX28DRAFT_2143 0.43 -0.9 2,165,199 - EX28DRAFT_2143 0.51 +0.6 2,165,244 - EX28DRAFT_2143 0.55 +0.1 2,165,286 - EX28DRAFT_2143 0.58 -0.6 2,165,286 - EX28DRAFT_2143 0.58 -2.5 2,165,382 + EX28DRAFT_2143 0.66 +0.2 2,165,382 + EX28DRAFT_2143 0.66 +0.2 2,165,408 + EX28DRAFT_2143 0.68 -0.7 2,165,409 - EX28DRAFT_2143 0.68 -0.1 2,165,409 - EX28DRAFT_2143 0.68 -0.9 2,165,630 + EX28DRAFT_2143 0.85 +0.5 2,165,631 - EX28DRAFT_2143 0.86 -1.0 2,165,631 - EX28DRAFT_2143 0.86 -0.1 2,165,631 - EX28DRAFT_2143 0.86 +1.2 2,165,736 - +1.7 2,165,810 + -0.0 2,165,810 + -0.7 2,165,819 + -0.1 2,165,820 - +0.3 2,165,863 + -0.5 2,165,955 + EX28DRAFT_2144 0.14 +0.1 2,165,957 + EX28DRAFT_2144 0.14 -0.0 2,165,957 + EX28DRAFT_2144 0.14 +0.2 2,165,957 + EX28DRAFT_2144 0.14 -0.2 2,166,148 + EX28DRAFT_2144 0.32 -0.1 2,166,439 - EX28DRAFT_2144 0.59 +0.2 2,166,439 - EX28DRAFT_2144 0.59 -0.4 2,166,705 + EX28DRAFT_2144 0.83 -0.5 2,166,705 + EX28DRAFT_2144 0.83 +0.0
Or see this region's nucleotide sequence