Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2068 and EX28DRAFT_2069 are separated by 259 nucleotides EX28DRAFT_2069 and EX28DRAFT_2070 overlap by 4 nucleotides EX28DRAFT_2070 and EX28DRAFT_2071 overlap by 4 nucleotides
EX28DRAFT_2068: EX28DRAFT_2068 - Chitinase, at 2,092,852 to 2,095,578
_2068
EX28DRAFT_2069: EX28DRAFT_2069 - Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, at 2,095,838 to 2,096,629
_2069
EX28DRAFT_2070: EX28DRAFT_2070 - Type II secretory pathway, component PulM, at 2,096,626 to 2,097,111
_2070
EX28DRAFT_2071: EX28DRAFT_2071 - Type II secretory pathway, component PulL, at 2,097,108 to 2,098,262
_2071
Position (kb)
2095
2096
2097 Strain fitness (log2 ratio)
-2
-1
0
1 at 2095.125 kb on + strand, within EX28DRAFT_2068 at 2095.137 kb on + strand, within EX28DRAFT_2068 at 2095.140 kb on + strand, within EX28DRAFT_2068 at 2095.434 kb on - strand at 2095.440 kb on + strand at 2095.441 kb on - strand at 2095.895 kb on - strand at 2095.897 kb on - strand at 2095.957 kb on + strand, within EX28DRAFT_2069 at 2096.038 kb on + strand, within EX28DRAFT_2069 at 2096.050 kb on - strand, within EX28DRAFT_2069 at 2096.055 kb on - strand, within EX28DRAFT_2069 at 2096.055 kb on - strand, within EX28DRAFT_2069 at 2096.091 kb on + strand, within EX28DRAFT_2069 at 2096.131 kb on - strand, within EX28DRAFT_2069 at 2096.134 kb on + strand, within EX28DRAFT_2069 at 2096.224 kb on + strand, within EX28DRAFT_2069 at 2096.225 kb on - strand, within EX28DRAFT_2069 at 2096.225 kb on - strand, within EX28DRAFT_2069 at 2096.522 kb on - strand, within EX28DRAFT_2069 at 2096.522 kb on - strand, within EX28DRAFT_2069 at 2096.946 kb on + strand, within EX28DRAFT_2070 at 2096.951 kb on - strand, within EX28DRAFT_2070 at 2096.951 kb on - strand, within EX28DRAFT_2070 at 2097.115 kb on + strand at 2097.115 kb on + strand at 2097.139 kb on + strand at 2097.139 kb on + strand at 2097.221 kb on + strand at 2097.376 kb on + strand, within EX28DRAFT_2071 at 2097.376 kb on + strand, within EX28DRAFT_2071 at 2097.377 kb on - strand, within EX28DRAFT_2071 at 2097.379 kb on + strand, within EX28DRAFT_2071 at 2097.379 kb on + strand, within EX28DRAFT_2071 at 2097.415 kb on + strand, within EX28DRAFT_2071 at 2097.415 kb on + strand, within EX28DRAFT_2071 at 2097.483 kb on - strand, within EX28DRAFT_2071
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,095,125 + EX28DRAFT_2068 0.83 -0.5 2,095,137 + EX28DRAFT_2068 0.84 +0.6 2,095,140 + EX28DRAFT_2068 0.84 +0.3 2,095,434 - +0.0 2,095,440 + +0.6 2,095,441 - -0.7 2,095,895 - -0.7 2,095,897 - -0.6 2,095,957 + EX28DRAFT_2069 0.15 -0.1 2,096,038 + EX28DRAFT_2069 0.25 +0.2 2,096,050 - EX28DRAFT_2069 0.27 -0.2 2,096,055 - EX28DRAFT_2069 0.27 +0.5 2,096,055 - EX28DRAFT_2069 0.27 +0.2 2,096,091 + EX28DRAFT_2069 0.32 -0.1 2,096,131 - EX28DRAFT_2069 0.37 +0.5 2,096,134 + EX28DRAFT_2069 0.37 +0.1 2,096,224 + EX28DRAFT_2069 0.49 -0.9 2,096,225 - EX28DRAFT_2069 0.49 -0.1 2,096,225 - EX28DRAFT_2069 0.49 +0.5 2,096,522 - EX28DRAFT_2069 0.86 -0.0 2,096,522 - EX28DRAFT_2069 0.86 +0.4 2,096,946 + EX28DRAFT_2070 0.66 +0.4 2,096,951 - EX28DRAFT_2070 0.67 -0.1 2,096,951 - EX28DRAFT_2070 0.67 +0.8 2,097,115 + -0.7 2,097,115 + -2.0 2,097,139 + -2.1 2,097,139 + +0.6 2,097,221 + +0.7 2,097,376 + EX28DRAFT_2071 0.23 -0.8 2,097,376 + EX28DRAFT_2071 0.23 +0.0 2,097,377 - EX28DRAFT_2071 0.23 -0.2 2,097,379 + EX28DRAFT_2071 0.23 +0.7 2,097,379 + EX28DRAFT_2071 0.23 -1.5 2,097,415 + EX28DRAFT_2071 0.27 -1.7 2,097,415 + EX28DRAFT_2071 0.27 -0.3 2,097,483 - EX28DRAFT_2071 0.32 -0.5
Or see this region's nucleotide sequence