Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2036 and EX28DRAFT_2037 are separated by 1 nucleotides EX28DRAFT_2037 and EX28DRAFT_2038 are separated by 10 nucleotides EX28DRAFT_2038 and EX28DRAFT_2039 are separated by 211 nucleotides
EX28DRAFT_2036: EX28DRAFT_2036 - DMSO reductase anchor subunit, at 2,050,943 to 2,051,806
_2036
EX28DRAFT_2037: EX28DRAFT_2037 - DMSO reductase, iron-sulfur subunit, at 2,051,808 to 2,052,425
_2037
EX28DRAFT_2038: EX28DRAFT_2038 - anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family, at 2,052,436 to 2,054,880
_2038
EX28DRAFT_2039: EX28DRAFT_2039 - seryl-tRNA synthetase (EC 6.1.1.11), at 2,055,092 to 2,056,384
_2039
Position (kb)
2052
2053
2054
2055 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2051.853 kb on - strand at 2051.853 kb on - strand at 2052.080 kb on - strand, within EX28DRAFT_2037 at 2052.307 kb on + strand, within EX28DRAFT_2037 at 2052.402 kb on - strand at 2052.523 kb on - strand at 2052.652 kb on - strand at 2052.736 kb on + strand, within EX28DRAFT_2038 at 2052.737 kb on - strand, within EX28DRAFT_2038 at 2052.827 kb on + strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.848 kb on + strand, within EX28DRAFT_2038 at 2052.848 kb on + strand, within EX28DRAFT_2038 at 2052.849 kb on - strand, within EX28DRAFT_2038 at 2052.924 kb on - strand, within EX28DRAFT_2038 at 2053.025 kb on + strand, within EX28DRAFT_2038 at 2053.025 kb on + strand, within EX28DRAFT_2038 at 2053.026 kb on - strand, within EX28DRAFT_2038 at 2053.026 kb on - strand, within EX28DRAFT_2038 at 2053.026 kb on - strand, within EX28DRAFT_2038 at 2053.029 kb on + strand, within EX28DRAFT_2038 at 2053.119 kb on + strand, within EX28DRAFT_2038 at 2053.182 kb on - strand, within EX28DRAFT_2038 at 2053.236 kb on - strand, within EX28DRAFT_2038 at 2053.317 kb on - strand, within EX28DRAFT_2038 at 2053.439 kb on + strand, within EX28DRAFT_2038 at 2053.439 kb on + strand, within EX28DRAFT_2038 at 2053.439 kb on + strand, within EX28DRAFT_2038 at 2053.440 kb on - strand, within EX28DRAFT_2038 at 2053.542 kb on + strand, within EX28DRAFT_2038 at 2053.543 kb on - strand, within EX28DRAFT_2038 at 2053.543 kb on - strand, within EX28DRAFT_2038 at 2053.587 kb on + strand, within EX28DRAFT_2038 at 2053.588 kb on - strand, within EX28DRAFT_2038 at 2053.740 kb on - strand, within EX28DRAFT_2038 at 2053.860 kb on + strand, within EX28DRAFT_2038 at 2053.862 kb on + strand, within EX28DRAFT_2038 at 2053.863 kb on - strand, within EX28DRAFT_2038 at 2053.863 kb on - strand, within EX28DRAFT_2038 at 2053.863 kb on - strand, within EX28DRAFT_2038 at 2053.872 kb on - strand, within EX28DRAFT_2038 at 2053.928 kb on + strand, within EX28DRAFT_2038 at 2053.928 kb on + strand, within EX28DRAFT_2038 at 2053.929 kb on - strand, within EX28DRAFT_2038 at 2053.993 kb on + strand, within EX28DRAFT_2038 at 2053.993 kb on + strand, within EX28DRAFT_2038 at 2054.058 kb on + strand, within EX28DRAFT_2038 at 2054.118 kb on - strand, within EX28DRAFT_2038 at 2054.120 kb on + strand, within EX28DRAFT_2038 at 2054.120 kb on + strand, within EX28DRAFT_2038 at 2054.121 kb on - strand, within EX28DRAFT_2038 at 2054.231 kb on + strand, within EX28DRAFT_2038 at 2054.231 kb on + strand, within EX28DRAFT_2038 at 2054.270 kb on + strand, within EX28DRAFT_2038 at 2054.280 kb on - strand, within EX28DRAFT_2038 at 2054.286 kb on + strand, within EX28DRAFT_2038 at 2054.286 kb on + strand, within EX28DRAFT_2038 at 2054.381 kb on + strand, within EX28DRAFT_2038 at 2054.451 kb on - strand, within EX28DRAFT_2038 at 2054.516 kb on + strand, within EX28DRAFT_2038 at 2054.537 kb on + strand, within EX28DRAFT_2038 at 2054.538 kb on - strand, within EX28DRAFT_2038 at 2054.538 kb on - strand, within EX28DRAFT_2038 at 2054.587 kb on + strand, within EX28DRAFT_2038 at 2054.597 kb on + strand, within EX28DRAFT_2038 at 2054.597 kb on + strand, within EX28DRAFT_2038 at 2054.597 kb on + strand, within EX28DRAFT_2038 at 2054.597 kb on + strand, within EX28DRAFT_2038 at 2054.597 kb on + strand, within EX28DRAFT_2038 at 2054.598 kb on - strand, within EX28DRAFT_2038 at 2054.598 kb on - strand, within EX28DRAFT_2038 at 2054.630 kb on + strand, within EX28DRAFT_2038 at 2054.630 kb on + strand, within EX28DRAFT_2038 at 2054.635 kb on - strand, within EX28DRAFT_2038 at 2054.635 kb on - strand, within EX28DRAFT_2038 at 2054.658 kb on + strand at 2054.659 kb on - strand at 2054.685 kb on + strand at 2054.691 kb on + strand at 2054.962 kb on + strand at 2054.963 kb on - strand at 2055.001 kb on + strand at 2055.001 kb on + strand at 2055.004 kb on + strand at 2055.009 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,051,853 - +0.0 2,051,853 - -0.7 2,052,080 - EX28DRAFT_2037 0.44 +1.3 2,052,307 + EX28DRAFT_2037 0.81 -0.3 2,052,402 - +0.6 2,052,523 - +0.0 2,052,652 - -0.2 2,052,736 + EX28DRAFT_2038 0.12 -1.2 2,052,737 - EX28DRAFT_2038 0.12 +0.7 2,052,827 + EX28DRAFT_2038 0.16 -0.2 2,052,828 - EX28DRAFT_2038 0.16 +1.5 2,052,828 - EX28DRAFT_2038 0.16 -0.9 2,052,828 - EX28DRAFT_2038 0.16 -0.2 2,052,828 - EX28DRAFT_2038 0.16 -0.2 2,052,848 + EX28DRAFT_2038 0.17 -0.5 2,052,848 + EX28DRAFT_2038 0.17 +0.8 2,052,849 - EX28DRAFT_2038 0.17 -0.1 2,052,924 - EX28DRAFT_2038 0.20 -0.2 2,053,025 + EX28DRAFT_2038 0.24 +0.8 2,053,025 + EX28DRAFT_2038 0.24 -0.8 2,053,026 - EX28DRAFT_2038 0.24 +0.3 2,053,026 - EX28DRAFT_2038 0.24 -0.1 2,053,026 - EX28DRAFT_2038 0.24 +0.7 2,053,029 + EX28DRAFT_2038 0.24 -0.3 2,053,119 + EX28DRAFT_2038 0.28 +0.1 2,053,182 - EX28DRAFT_2038 0.31 +0.2 2,053,236 - EX28DRAFT_2038 0.33 +0.1 2,053,317 - EX28DRAFT_2038 0.36 +0.8 2,053,439 + EX28DRAFT_2038 0.41 +0.6 2,053,439 + EX28DRAFT_2038 0.41 -1.0 2,053,439 + EX28DRAFT_2038 0.41 -0.3 2,053,440 - EX28DRAFT_2038 0.41 +0.4 2,053,542 + EX28DRAFT_2038 0.45 +0.4 2,053,543 - EX28DRAFT_2038 0.45 -2.8 2,053,543 - EX28DRAFT_2038 0.45 -0.1 2,053,587 + EX28DRAFT_2038 0.47 -1.0 2,053,588 - EX28DRAFT_2038 0.47 +0.7 2,053,740 - EX28DRAFT_2038 0.53 +0.0 2,053,860 + EX28DRAFT_2038 0.58 +0.5 2,053,862 + EX28DRAFT_2038 0.58 +0.7 2,053,863 - EX28DRAFT_2038 0.58 +0.4 2,053,863 - EX28DRAFT_2038 0.58 +0.4 2,053,863 - EX28DRAFT_2038 0.58 -0.4 2,053,872 - EX28DRAFT_2038 0.59 +1.1 2,053,928 + EX28DRAFT_2038 0.61 +0.4 2,053,928 + EX28DRAFT_2038 0.61 -0.8 2,053,929 - EX28DRAFT_2038 0.61 -0.7 2,053,993 + EX28DRAFT_2038 0.64 -0.4 2,053,993 + EX28DRAFT_2038 0.64 +0.0 2,054,058 + EX28DRAFT_2038 0.66 +0.4 2,054,118 - EX28DRAFT_2038 0.69 -0.1 2,054,120 + EX28DRAFT_2038 0.69 +0.2 2,054,120 + EX28DRAFT_2038 0.69 -0.1 2,054,121 - EX28DRAFT_2038 0.69 +0.2 2,054,231 + EX28DRAFT_2038 0.73 -0.7 2,054,231 + EX28DRAFT_2038 0.73 +0.0 2,054,270 + EX28DRAFT_2038 0.75 +0.2 2,054,280 - EX28DRAFT_2038 0.75 +0.4 2,054,286 + EX28DRAFT_2038 0.76 -1.3 2,054,286 + EX28DRAFT_2038 0.76 +2.2 2,054,381 + EX28DRAFT_2038 0.80 -0.8 2,054,451 - EX28DRAFT_2038 0.82 +0.6 2,054,516 + EX28DRAFT_2038 0.85 -0.6 2,054,537 + EX28DRAFT_2038 0.86 +0.3 2,054,538 - EX28DRAFT_2038 0.86 +0.0 2,054,538 - EX28DRAFT_2038 0.86 +0.4 2,054,587 + EX28DRAFT_2038 0.88 +0.5 2,054,597 + EX28DRAFT_2038 0.88 +0.1 2,054,597 + EX28DRAFT_2038 0.88 -0.0 2,054,597 + EX28DRAFT_2038 0.88 +0.2 2,054,597 + EX28DRAFT_2038 0.88 +0.4 2,054,597 + EX28DRAFT_2038 0.88 +0.2 2,054,598 - EX28DRAFT_2038 0.88 +1.4 2,054,598 - EX28DRAFT_2038 0.88 -0.1 2,054,630 + EX28DRAFT_2038 0.90 +0.1 2,054,630 + EX28DRAFT_2038 0.90 -0.1 2,054,635 - EX28DRAFT_2038 0.90 +0.1 2,054,635 - EX28DRAFT_2038 0.90 -0.2 2,054,658 + +0.7 2,054,659 - +0.1 2,054,685 + -0.2 2,054,691 + -0.2 2,054,962 + +0.2 2,054,963 - -2.4 2,055,001 + +0.1 2,055,001 + +0.3 2,055,004 + -0.3 2,055,009 + -0.0
Or see this region's nucleotide sequence