Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1951 and EX28DRAFT_1952 are separated by 17 nucleotides EX28DRAFT_1952 and EX28DRAFT_1953 are separated by 11 nucleotides EX28DRAFT_1953 and EX28DRAFT_1954 are separated by 43 nucleotides
EX28DRAFT_1951: EX28DRAFT_1951 - 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases, at 1,955,902 to 1,957,056
_1951
EX28DRAFT_1952: EX28DRAFT_1952 - Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit, at 1,957,074 to 1,958,108
_1952
EX28DRAFT_1953: EX28DRAFT_1953 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 1,958,120 to 1,959,055
_1953
EX28DRAFT_1954: EX28DRAFT_1954 - tRNA, at 1,959,099 to 1,959,186
_1954
Position (kb)
1957
1958
1959 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1956.119 kb on - strand, within EX28DRAFT_1951 at 1956.284 kb on + strand, within EX28DRAFT_1951 at 1956.548 kb on - strand, within EX28DRAFT_1951 at 1956.925 kb on - strand, within EX28DRAFT_1951 at 1956.976 kb on + strand at 1957.317 kb on - strand, within EX28DRAFT_1952 at 1957.367 kb on + strand, within EX28DRAFT_1952 at 1957.419 kb on + strand, within EX28DRAFT_1952 at 1957.419 kb on + strand, within EX28DRAFT_1952 at 1957.623 kb on - strand, within EX28DRAFT_1952 at 1957.623 kb on - strand, within EX28DRAFT_1952 at 1957.719 kb on + strand, within EX28DRAFT_1952 at 1957.916 kb on + strand, within EX28DRAFT_1952 at 1957.933 kb on + strand, within EX28DRAFT_1952 at 1957.933 kb on + strand, within EX28DRAFT_1952 at 1957.934 kb on - strand, within EX28DRAFT_1952 at 1958.104 kb on + strand at 1958.104 kb on + strand at 1958.105 kb on - strand at 1958.162 kb on - strand at 1958.202 kb on + strand at 1958.300 kb on + strand, within EX28DRAFT_1953 at 1958.300 kb on + strand, within EX28DRAFT_1953 at 1958.300 kb on + strand, within EX28DRAFT_1953 at 1958.301 kb on - strand, within EX28DRAFT_1953 at 1958.301 kb on - strand, within EX28DRAFT_1953 at 1958.306 kb on - strand, within EX28DRAFT_1953 at 1958.349 kb on - strand, within EX28DRAFT_1953 at 1958.471 kb on + strand, within EX28DRAFT_1953 at 1958.512 kb on + strand, within EX28DRAFT_1953 at 1958.522 kb on + strand, within EX28DRAFT_1953 at 1958.522 kb on + strand, within EX28DRAFT_1953 at 1958.523 kb on - strand, within EX28DRAFT_1953 at 1958.525 kb on + strand, within EX28DRAFT_1953 at 1958.526 kb on - strand, within EX28DRAFT_1953 at 1958.526 kb on - strand, within EX28DRAFT_1953 at 1958.526 kb on - strand, within EX28DRAFT_1953 at 1958.859 kb on + strand, within EX28DRAFT_1953 at 1958.863 kb on - strand, within EX28DRAFT_1953
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,956,119 - EX28DRAFT_1951 0.19 +0.4 1,956,284 + EX28DRAFT_1951 0.33 +0.2 1,956,548 - EX28DRAFT_1951 0.56 +0.5 1,956,925 - EX28DRAFT_1951 0.89 +0.3 1,956,976 + +0.0 1,957,317 - EX28DRAFT_1952 0.23 -1.9 1,957,367 + EX28DRAFT_1952 0.28 -0.2 1,957,419 + EX28DRAFT_1952 0.33 -0.1 1,957,419 + EX28DRAFT_1952 0.33 -0.1 1,957,623 - EX28DRAFT_1952 0.53 +0.2 1,957,623 - EX28DRAFT_1952 0.53 +0.0 1,957,719 + EX28DRAFT_1952 0.62 -0.9 1,957,916 + EX28DRAFT_1952 0.81 +0.2 1,957,933 + EX28DRAFT_1952 0.83 -1.0 1,957,933 + EX28DRAFT_1952 0.83 -0.1 1,957,934 - EX28DRAFT_1952 0.83 +0.3 1,958,104 + +0.0 1,958,104 + -0.8 1,958,105 - +1.4 1,958,162 - -0.5 1,958,202 + +0.9 1,958,300 + EX28DRAFT_1953 0.19 +0.7 1,958,300 + EX28DRAFT_1953 0.19 -0.9 1,958,300 + EX28DRAFT_1953 0.19 +0.1 1,958,301 - EX28DRAFT_1953 0.19 +0.2 1,958,301 - EX28DRAFT_1953 0.19 +0.1 1,958,306 - EX28DRAFT_1953 0.20 -0.0 1,958,349 - EX28DRAFT_1953 0.24 +0.0 1,958,471 + EX28DRAFT_1953 0.38 +0.2 1,958,512 + EX28DRAFT_1953 0.42 -0.1 1,958,522 + EX28DRAFT_1953 0.43 -0.0 1,958,522 + EX28DRAFT_1953 0.43 +1.8 1,958,523 - EX28DRAFT_1953 0.43 +0.8 1,958,525 + EX28DRAFT_1953 0.43 +0.1 1,958,526 - EX28DRAFT_1953 0.43 -0.1 1,958,526 - EX28DRAFT_1953 0.43 -0.4 1,958,526 - EX28DRAFT_1953 0.43 -0.1 1,958,859 + EX28DRAFT_1953 0.79 -0.1 1,958,863 - EX28DRAFT_1953 0.79 +0.4
Or see this region's nucleotide sequence