Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1537

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1536 and EX28DRAFT_1537 overlap by 1 nucleotidesEX28DRAFT_1537 and EX28DRAFT_1538 are separated by 36 nucleotides EX28DRAFT_1536: EX28DRAFT_1536 - amidohydrolase, at 1,550,338 to 1,551,648 _1536 EX28DRAFT_1537: EX28DRAFT_1537 - amidohydrolase, at 1,551,648 to 1,553,093 _1537 EX28DRAFT_1538: EX28DRAFT_1538 - p-Aminobenzoyl-glutamate transporter family, at 1,553,130 to 1,554,656 _1538 Position (kb) 1551 1552 1553 1554Strain fitness (log2 ratio) -2 -1 0 1 2at 1550.944 kb on + strand, within EX28DRAFT_1536at 1550.961 kb on + strand, within EX28DRAFT_1536at 1550.961 kb on + strand, within EX28DRAFT_1536at 1550.961 kb on + strand, within EX28DRAFT_1536at 1550.961 kb on + strand, within EX28DRAFT_1536at 1551.313 kb on + strand, within EX28DRAFT_1536at 1551.313 kb on + strand, within EX28DRAFT_1536at 1551.514 kb on + strand, within EX28DRAFT_1536at 1551.514 kb on + strand, within EX28DRAFT_1536at 1551.514 kb on + strand, within EX28DRAFT_1536at 1551.515 kb on - strand, within EX28DRAFT_1536at 1551.515 kb on - strand, within EX28DRAFT_1536at 1551.516 kb on + strand, within EX28DRAFT_1536at 1551.647 kb on - strandat 1551.647 kb on - strandat 1551.647 kb on - strandat 1551.669 kb on - strandat 1552.068 kb on + strand, within EX28DRAFT_1537at 1552.110 kb on - strand, within EX28DRAFT_1537at 1552.184 kb on + strand, within EX28DRAFT_1537at 1552.354 kb on - strand, within EX28DRAFT_1537at 1552.417 kb on - strand, within EX28DRAFT_1537at 1552.458 kb on + strand, within EX28DRAFT_1537at 1552.458 kb on + strand, within EX28DRAFT_1537at 1552.458 kb on + strand, within EX28DRAFT_1537at 1552.529 kb on + strand, within EX28DRAFT_1537at 1552.579 kb on - strand, within EX28DRAFT_1537at 1552.865 kb on + strand, within EX28DRAFT_1537at 1552.913 kb on + strand, within EX28DRAFT_1537at 1552.914 kb on - strand, within EX28DRAFT_1537at 1553.033 kb on - strandat 1553.047 kb on - strandat 1553.135 kb on + strandat 1553.135 kb on + strandat 1553.135 kb on + strandat 1553.146 kb on + strandat 1553.176 kb on - strandat 1553.228 kb on + strandat 1553.228 kb on + strandat 1553.232 kb on + strandat 1553.233 kb on - strandat 1553.233 kb on - strandat 1553.249 kb on - strandat 1553.503 kb on - strand, within EX28DRAFT_1538at 1553.511 kb on + strand, within EX28DRAFT_1538at 1553.511 kb on + strand, within EX28DRAFT_1538at 1553.512 kb on - strand, within EX28DRAFT_1538at 1553.512 kb on - strand, within EX28DRAFT_1538at 1553.512 kb on - strand, within EX28DRAFT_1538at 1553.513 kb on + strand, within EX28DRAFT_1538at 1553.513 kb on + strand, within EX28DRAFT_1538at 1553.987 kb on - strand, within EX28DRAFT_1538at 1554.003 kb on - strand, within EX28DRAFT_1538at 1554.008 kb on + strand, within EX28DRAFT_1538

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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1,550,944 + EX28DRAFT_1536 0.46 +0.0
1,550,961 + EX28DRAFT_1536 0.48 +0.4
1,550,961 + EX28DRAFT_1536 0.48 +0.8
1,550,961 + EX28DRAFT_1536 0.48 +0.5
1,550,961 + EX28DRAFT_1536 0.48 +0.4
1,551,313 + EX28DRAFT_1536 0.74 +0.4
1,551,313 + EX28DRAFT_1536 0.74 +0.2
1,551,514 + EX28DRAFT_1536 0.90 +0.4
1,551,514 + EX28DRAFT_1536 0.90 +0.8
1,551,514 + EX28DRAFT_1536 0.90 -0.0
1,551,515 - EX28DRAFT_1536 0.90 -0.9
1,551,515 - EX28DRAFT_1536 0.90 +0.6
1,551,516 + EX28DRAFT_1536 0.90 +0.3
1,551,647 - -0.5
1,551,647 - +0.6
1,551,647 - -0.4
1,551,669 - -0.6
1,552,068 + EX28DRAFT_1537 0.29 +0.1
1,552,110 - EX28DRAFT_1537 0.32 +0.5
1,552,184 + EX28DRAFT_1537 0.37 -0.2
1,552,354 - EX28DRAFT_1537 0.49 +1.1
1,552,417 - EX28DRAFT_1537 0.53 -0.2
1,552,458 + EX28DRAFT_1537 0.56 +0.2
1,552,458 + EX28DRAFT_1537 0.56 -1.4
1,552,458 + EX28DRAFT_1537 0.56 +1.0
1,552,529 + EX28DRAFT_1537 0.61 -1.3
1,552,579 - EX28DRAFT_1537 0.64 +0.2
1,552,865 + EX28DRAFT_1537 0.84 -0.9
1,552,913 + EX28DRAFT_1537 0.87 +0.2
1,552,914 - EX28DRAFT_1537 0.88 +1.0
1,553,033 - +0.4
1,553,047 - -0.4
1,553,135 + -0.0
1,553,135 + +0.7
1,553,135 + -0.8
1,553,146 + +0.4
1,553,176 - -0.4
1,553,228 + +2.1
1,553,228 + +0.5
1,553,232 + -0.5
1,553,233 - -0.5
1,553,233 - -2.6
1,553,249 - +0.6
1,553,503 - EX28DRAFT_1538 0.24 +1.1
1,553,511 + EX28DRAFT_1538 0.25 -0.7
1,553,511 + EX28DRAFT_1538 0.25 -0.6
1,553,512 - EX28DRAFT_1538 0.25 -0.4
1,553,512 - EX28DRAFT_1538 0.25 +0.4
1,553,512 - EX28DRAFT_1538 0.25 -0.1
1,553,513 + EX28DRAFT_1538 0.25 -0.4
1,553,513 + EX28DRAFT_1538 0.25 -1.5
1,553,987 - EX28DRAFT_1538 0.56 -0.7
1,554,003 - EX28DRAFT_1538 0.57 +1.0
1,554,008 + EX28DRAFT_1538 0.57 -0.2

Or see this region's nucleotide sequence