Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1536 and EX28DRAFT_1537 overlap by 1 nucleotides EX28DRAFT_1537 and EX28DRAFT_1538 are separated by 36 nucleotides
EX28DRAFT_1536: EX28DRAFT_1536 - amidohydrolase, at 1,550,338 to 1,551,648
_1536
EX28DRAFT_1537: EX28DRAFT_1537 - amidohydrolase, at 1,551,648 to 1,553,093
_1537
EX28DRAFT_1538: EX28DRAFT_1538 - p-Aminobenzoyl-glutamate transporter family, at 1,553,130 to 1,554,656
_1538
Position (kb)
1551
1552
1553
1554 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1550.944 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1550.961 kb on + strand, within EX28DRAFT_1536 at 1551.313 kb on + strand, within EX28DRAFT_1536 at 1551.313 kb on + strand, within EX28DRAFT_1536 at 1551.514 kb on + strand, within EX28DRAFT_1536 at 1551.514 kb on + strand, within EX28DRAFT_1536 at 1551.514 kb on + strand, within EX28DRAFT_1536 at 1551.515 kb on - strand, within EX28DRAFT_1536 at 1551.515 kb on - strand, within EX28DRAFT_1536 at 1551.516 kb on + strand, within EX28DRAFT_1536 at 1551.647 kb on - strand at 1551.647 kb on - strand at 1551.647 kb on - strand at 1551.669 kb on - strand at 1552.068 kb on + strand, within EX28DRAFT_1537 at 1552.110 kb on - strand, within EX28DRAFT_1537 at 1552.184 kb on + strand, within EX28DRAFT_1537 at 1552.354 kb on - strand, within EX28DRAFT_1537 at 1552.417 kb on - strand, within EX28DRAFT_1537 at 1552.458 kb on + strand, within EX28DRAFT_1537 at 1552.458 kb on + strand, within EX28DRAFT_1537 at 1552.458 kb on + strand, within EX28DRAFT_1537 at 1552.529 kb on + strand, within EX28DRAFT_1537 at 1552.579 kb on - strand, within EX28DRAFT_1537 at 1552.865 kb on + strand, within EX28DRAFT_1537 at 1552.913 kb on + strand, within EX28DRAFT_1537 at 1552.914 kb on - strand, within EX28DRAFT_1537 at 1553.033 kb on - strand at 1553.047 kb on - strand at 1553.135 kb on + strand at 1553.135 kb on + strand at 1553.135 kb on + strand at 1553.146 kb on + strand at 1553.176 kb on - strand at 1553.228 kb on + strand at 1553.228 kb on + strand at 1553.232 kb on + strand at 1553.233 kb on - strand at 1553.233 kb on - strand at 1553.249 kb on - strand at 1553.503 kb on - strand, within EX28DRAFT_1538 at 1553.511 kb on + strand, within EX28DRAFT_1538 at 1553.511 kb on + strand, within EX28DRAFT_1538 at 1553.512 kb on - strand, within EX28DRAFT_1538 at 1553.512 kb on - strand, within EX28DRAFT_1538 at 1553.512 kb on - strand, within EX28DRAFT_1538 at 1553.513 kb on + strand, within EX28DRAFT_1538 at 1553.513 kb on + strand, within EX28DRAFT_1538 at 1553.987 kb on - strand, within EX28DRAFT_1538 at 1554.003 kb on - strand, within EX28DRAFT_1538 at 1554.008 kb on + strand, within EX28DRAFT_1538
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,550,944 + EX28DRAFT_1536 0.46 +0.0 1,550,961 + EX28DRAFT_1536 0.48 +0.4 1,550,961 + EX28DRAFT_1536 0.48 +0.8 1,550,961 + EX28DRAFT_1536 0.48 +0.5 1,550,961 + EX28DRAFT_1536 0.48 +0.4 1,551,313 + EX28DRAFT_1536 0.74 +0.4 1,551,313 + EX28DRAFT_1536 0.74 +0.2 1,551,514 + EX28DRAFT_1536 0.90 +0.4 1,551,514 + EX28DRAFT_1536 0.90 +0.8 1,551,514 + EX28DRAFT_1536 0.90 -0.0 1,551,515 - EX28DRAFT_1536 0.90 -0.9 1,551,515 - EX28DRAFT_1536 0.90 +0.6 1,551,516 + EX28DRAFT_1536 0.90 +0.3 1,551,647 - -0.5 1,551,647 - +0.6 1,551,647 - -0.4 1,551,669 - -0.6 1,552,068 + EX28DRAFT_1537 0.29 +0.1 1,552,110 - EX28DRAFT_1537 0.32 +0.5 1,552,184 + EX28DRAFT_1537 0.37 -0.2 1,552,354 - EX28DRAFT_1537 0.49 +1.1 1,552,417 - EX28DRAFT_1537 0.53 -0.2 1,552,458 + EX28DRAFT_1537 0.56 +0.2 1,552,458 + EX28DRAFT_1537 0.56 -1.4 1,552,458 + EX28DRAFT_1537 0.56 +1.0 1,552,529 + EX28DRAFT_1537 0.61 -1.3 1,552,579 - EX28DRAFT_1537 0.64 +0.2 1,552,865 + EX28DRAFT_1537 0.84 -0.9 1,552,913 + EX28DRAFT_1537 0.87 +0.2 1,552,914 - EX28DRAFT_1537 0.88 +1.0 1,553,033 - +0.4 1,553,047 - -0.4 1,553,135 + -0.0 1,553,135 + +0.7 1,553,135 + -0.8 1,553,146 + +0.4 1,553,176 - -0.4 1,553,228 + +2.1 1,553,228 + +0.5 1,553,232 + -0.5 1,553,233 - -0.5 1,553,233 - -2.6 1,553,249 - +0.6 1,553,503 - EX28DRAFT_1538 0.24 +1.1 1,553,511 + EX28DRAFT_1538 0.25 -0.7 1,553,511 + EX28DRAFT_1538 0.25 -0.6 1,553,512 - EX28DRAFT_1538 0.25 -0.4 1,553,512 - EX28DRAFT_1538 0.25 +0.4 1,553,512 - EX28DRAFT_1538 0.25 -0.1 1,553,513 + EX28DRAFT_1538 0.25 -0.4 1,553,513 + EX28DRAFT_1538 0.25 -1.5 1,553,987 - EX28DRAFT_1538 0.56 -0.7 1,554,003 - EX28DRAFT_1538 0.57 +1.0 1,554,008 + EX28DRAFT_1538 0.57 -0.2
Or see this region's nucleotide sequence