Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1307 and EX28DRAFT_1308 overlap by 4 nucleotides EX28DRAFT_1308 and EX28DRAFT_1309 overlap by 4 nucleotides EX28DRAFT_1309 and EX28DRAFT_1310 are separated by 1 nucleotides EX28DRAFT_1310 and EX28DRAFT_1311 overlap by 4 nucleotides
EX28DRAFT_1307: EX28DRAFT_1307 - hypothetical protein, at 1,313,625 to 1,313,978
_1307
EX28DRAFT_1308: EX28DRAFT_1308 - hypothetical protein, at 1,313,975 to 1,314,172
_1308
EX28DRAFT_1309: EX28DRAFT_1309 - hypothetical protein, at 1,314,169 to 1,314,744
_1309
EX28DRAFT_1310: EX28DRAFT_1310 - phage replication protein P, at 1,314,746 to 1,315,435
_1310
EX28DRAFT_1311: EX28DRAFT_1311 - phage replication protein O, at 1,315,432 to 1,316,397
_1311
Position (kb)
1314
1315
1316 Strain fitness (log2 ratio)
-1
0
1 at 1313.845 kb on - strand, within EX28DRAFT_1307 at 1313.883 kb on + strand, within EX28DRAFT_1307 at 1313.919 kb on + strand, within EX28DRAFT_1307 at 1313.952 kb on + strand at 1314.012 kb on - strand, within EX28DRAFT_1308 at 1314.113 kb on + strand, within EX28DRAFT_1308 at 1314.179 kb on - strand at 1314.179 kb on - strand at 1314.355 kb on + strand, within EX28DRAFT_1309 at 1314.437 kb on - strand, within EX28DRAFT_1309 at 1314.667 kb on + strand, within EX28DRAFT_1309 at 1314.713 kb on + strand at 1314.713 kb on + strand at 1314.714 kb on - strand at 1314.734 kb on - strand at 1314.932 kb on + strand, within EX28DRAFT_1310 at 1314.978 kb on + strand, within EX28DRAFT_1310 at 1314.979 kb on - strand, within EX28DRAFT_1310 at 1315.604 kb on + strand, within EX28DRAFT_1311 at 1315.640 kb on - strand, within EX28DRAFT_1311 at 1315.666 kb on - strand, within EX28DRAFT_1311 at 1315.784 kb on + strand, within EX28DRAFT_1311 at 1315.870 kb on - strand, within EX28DRAFT_1311 at 1315.870 kb on - strand, within EX28DRAFT_1311 at 1315.878 kb on + strand, within EX28DRAFT_1311 at 1315.879 kb on - strand, within EX28DRAFT_1311 at 1315.890 kb on + strand, within EX28DRAFT_1311 at 1315.891 kb on - strand, within EX28DRAFT_1311 at 1315.915 kb on + strand, within EX28DRAFT_1311 at 1315.975 kb on - strand, within EX28DRAFT_1311 at 1316.010 kb on + strand, within EX28DRAFT_1311 at 1316.011 kb on - strand, within EX28DRAFT_1311 at 1316.064 kb on - strand, within EX28DRAFT_1311 at 1316.191 kb on + strand, within EX28DRAFT_1311 at 1316.191 kb on + strand, within EX28DRAFT_1311 at 1316.191 kb on + strand, within EX28DRAFT_1311
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,313,845 - EX28DRAFT_1307 0.62 +0.3 1,313,883 + EX28DRAFT_1307 0.73 -0.7 1,313,919 + EX28DRAFT_1307 0.83 +1.1 1,313,952 + -0.4 1,314,012 - EX28DRAFT_1308 0.19 -1.0 1,314,113 + EX28DRAFT_1308 0.70 +0.3 1,314,179 - +0.1 1,314,179 - -0.9 1,314,355 + EX28DRAFT_1309 0.32 +0.1 1,314,437 - EX28DRAFT_1309 0.47 -0.8 1,314,667 + EX28DRAFT_1309 0.86 +0.7 1,314,713 + -0.3 1,314,713 + +0.7 1,314,714 - -0.1 1,314,734 - +0.5 1,314,932 + EX28DRAFT_1310 0.27 -1.7 1,314,978 + EX28DRAFT_1310 0.34 -0.1 1,314,979 - EX28DRAFT_1310 0.34 +0.0 1,315,604 + EX28DRAFT_1311 0.18 -0.7 1,315,640 - EX28DRAFT_1311 0.22 +0.2 1,315,666 - EX28DRAFT_1311 0.24 +0.2 1,315,784 + EX28DRAFT_1311 0.36 +0.2 1,315,870 - EX28DRAFT_1311 0.45 +0.1 1,315,870 - EX28DRAFT_1311 0.45 -1.1 1,315,878 + EX28DRAFT_1311 0.46 +0.0 1,315,879 - EX28DRAFT_1311 0.46 -0.4 1,315,890 + EX28DRAFT_1311 0.47 +0.7 1,315,891 - EX28DRAFT_1311 0.48 -0.4 1,315,915 + EX28DRAFT_1311 0.50 +0.6 1,315,975 - EX28DRAFT_1311 0.56 -0.1 1,316,010 + EX28DRAFT_1311 0.60 -0.0 1,316,011 - EX28DRAFT_1311 0.60 -1.2 1,316,064 - EX28DRAFT_1311 0.65 +0.5 1,316,191 + EX28DRAFT_1311 0.79 +0.5 1,316,191 + EX28DRAFT_1311 0.79 +0.1 1,316,191 + EX28DRAFT_1311 0.79 -0.3
Or see this region's nucleotide sequence