Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1241 and EX28DRAFT_1242 are separated by 23 nucleotides EX28DRAFT_1242 and EX28DRAFT_1243 are separated by 21 nucleotides EX28DRAFT_1243 and EX28DRAFT_1244 are separated by 15 nucleotides EX28DRAFT_1244 and EX28DRAFT_1245 are separated by 68 nucleotides
EX28DRAFT_1241: EX28DRAFT_1241 - Uncharacterized protein conserved in bacteria, at 1,259,610 to 1,260,103
_1241
EX28DRAFT_1242: EX28DRAFT_1242 - hypothetical protein, at 1,260,127 to 1,260,330
_1242
EX28DRAFT_1243: EX28DRAFT_1243 - Uncharacterized protein conserved in bacteria, at 1,260,352 to 1,260,861
_1243
EX28DRAFT_1244: EX28DRAFT_1244 - Mn-containing catalase, at 1,260,877 to 1,261,749
_1244
EX28DRAFT_1245: EX28DRAFT_1245 - Cytochrome bd-type quinol oxidase, subunit 1, at 1,261,818 to 1,263,221
_1245
Position (kb)
1260
1261
1262 Strain fitness (log2 ratio)
-2
-1
0
1 at 1260.454 kb on - strand, within EX28DRAFT_1243 at 1260.489 kb on + strand, within EX28DRAFT_1243 at 1260.655 kb on + strand, within EX28DRAFT_1243 at 1260.677 kb on + strand, within EX28DRAFT_1243 at 1260.678 kb on - strand, within EX28DRAFT_1243 at 1260.685 kb on + strand, within EX28DRAFT_1243 at 1260.685 kb on + strand, within EX28DRAFT_1243 at 1260.685 kb on + strand, within EX28DRAFT_1243 at 1260.687 kb on + strand, within EX28DRAFT_1243 at 1260.688 kb on - strand, within EX28DRAFT_1243 at 1261.073 kb on + strand, within EX28DRAFT_1244 at 1261.073 kb on + strand, within EX28DRAFT_1244 at 1261.073 kb on + strand, within EX28DRAFT_1244 at 1261.074 kb on - strand, within EX28DRAFT_1244 at 1261.203 kb on + strand, within EX28DRAFT_1244 at 1261.203 kb on + strand, within EX28DRAFT_1244 at 1261.206 kb on + strand, within EX28DRAFT_1244 at 1261.206 kb on + strand, within EX28DRAFT_1244 at 1261.207 kb on - strand, within EX28DRAFT_1244 at 1261.207 kb on - strand, within EX28DRAFT_1244 at 1261.207 kb on - strand, within EX28DRAFT_1244 at 1261.219 kb on + strand, within EX28DRAFT_1244 at 1261.273 kb on + strand, within EX28DRAFT_1244 at 1261.273 kb on + strand, within EX28DRAFT_1244 at 1261.349 kb on - strand, within EX28DRAFT_1244 at 1261.349 kb on - strand, within EX28DRAFT_1244 at 1261.516 kb on + strand, within EX28DRAFT_1244 at 1261.516 kb on + strand, within EX28DRAFT_1244 at 1261.516 kb on + strand, within EX28DRAFT_1244 at 1261.517 kb on - strand, within EX28DRAFT_1244 at 1261.519 kb on + strand, within EX28DRAFT_1244 at 1261.520 kb on - strand, within EX28DRAFT_1244 at 1261.520 kb on - strand, within EX28DRAFT_1244 at 1261.520 kb on - strand, within EX28DRAFT_1244 at 1261.524 kb on + strand, within EX28DRAFT_1244 at 1261.524 kb on + strand, within EX28DRAFT_1244 at 1261.524 kb on + strand, within EX28DRAFT_1244 at 1261.525 kb on - strand, within EX28DRAFT_1244 at 1261.525 kb on - strand, within EX28DRAFT_1244 at 1261.734 kb on + strand at 1261.741 kb on - strand at 1261.741 kb on - strand at 1261.917 kb on + strand at 1261.918 kb on - strand at 1261.918 kb on - strand at 1261.977 kb on + strand, within EX28DRAFT_1245 at 1262.115 kb on + strand, within EX28DRAFT_1245 at 1262.115 kb on + strand, within EX28DRAFT_1245 at 1262.116 kb on - strand, within EX28DRAFT_1245 at 1262.181 kb on - strand, within EX28DRAFT_1245 at 1262.375 kb on + strand, within EX28DRAFT_1245 at 1262.376 kb on - strand, within EX28DRAFT_1245 at 1262.534 kb on + strand, within EX28DRAFT_1245 at 1262.534 kb on + strand, within EX28DRAFT_1245 at 1262.534 kb on + strand, within EX28DRAFT_1245 at 1262.535 kb on - strand, within EX28DRAFT_1245 at 1262.535 kb on - strand, within EX28DRAFT_1245 at 1262.670 kb on + strand, within EX28DRAFT_1245 at 1262.671 kb on - strand, within EX28DRAFT_1245 at 1262.671 kb on - strand, within EX28DRAFT_1245
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,260,454 - EX28DRAFT_1243 0.20 +0.1 1,260,489 + EX28DRAFT_1243 0.27 +0.7 1,260,655 + EX28DRAFT_1243 0.59 +0.0 1,260,677 + EX28DRAFT_1243 0.64 -0.1 1,260,678 - EX28DRAFT_1243 0.64 +0.3 1,260,685 + EX28DRAFT_1243 0.65 +0.6 1,260,685 + EX28DRAFT_1243 0.65 +0.1 1,260,685 + EX28DRAFT_1243 0.65 +0.2 1,260,687 + EX28DRAFT_1243 0.66 -0.6 1,260,688 - EX28DRAFT_1243 0.66 +0.5 1,261,073 + EX28DRAFT_1244 0.22 +1.2 1,261,073 + EX28DRAFT_1244 0.22 -1.7 1,261,073 + EX28DRAFT_1244 0.22 -0.0 1,261,074 - EX28DRAFT_1244 0.23 +1.3 1,261,203 + EX28DRAFT_1244 0.37 -0.6 1,261,203 + EX28DRAFT_1244 0.37 +0.3 1,261,206 + EX28DRAFT_1244 0.38 -0.9 1,261,206 + EX28DRAFT_1244 0.38 +0.6 1,261,207 - EX28DRAFT_1244 0.38 -0.0 1,261,207 - EX28DRAFT_1244 0.38 +0.6 1,261,207 - EX28DRAFT_1244 0.38 -0.1 1,261,219 + EX28DRAFT_1244 0.39 +0.0 1,261,273 + EX28DRAFT_1244 0.45 -0.4 1,261,273 + EX28DRAFT_1244 0.45 +0.5 1,261,349 - EX28DRAFT_1244 0.54 +0.7 1,261,349 - EX28DRAFT_1244 0.54 +0.3 1,261,516 + EX28DRAFT_1244 0.73 -1.3 1,261,516 + EX28DRAFT_1244 0.73 +0.8 1,261,516 + EX28DRAFT_1244 0.73 +0.3 1,261,517 - EX28DRAFT_1244 0.73 +0.1 1,261,519 + EX28DRAFT_1244 0.74 +0.2 1,261,520 - EX28DRAFT_1244 0.74 -0.0 1,261,520 - EX28DRAFT_1244 0.74 -0.5 1,261,520 - EX28DRAFT_1244 0.74 -0.2 1,261,524 + EX28DRAFT_1244 0.74 +0.3 1,261,524 + EX28DRAFT_1244 0.74 +0.5 1,261,524 + EX28DRAFT_1244 0.74 -0.2 1,261,525 - EX28DRAFT_1244 0.74 -0.5 1,261,525 - EX28DRAFT_1244 0.74 +0.2 1,261,734 + +0.1 1,261,741 - +0.2 1,261,741 - +0.2 1,261,917 + +0.5 1,261,918 - -0.0 1,261,918 - +0.4 1,261,977 + EX28DRAFT_1245 0.11 -0.8 1,262,115 + EX28DRAFT_1245 0.21 -0.1 1,262,115 + EX28DRAFT_1245 0.21 -0.2 1,262,116 - EX28DRAFT_1245 0.21 -0.8 1,262,181 - EX28DRAFT_1245 0.26 +0.1 1,262,375 + EX28DRAFT_1245 0.40 +0.6 1,262,376 - EX28DRAFT_1245 0.40 -1.1 1,262,534 + EX28DRAFT_1245 0.51 -0.1 1,262,534 + EX28DRAFT_1245 0.51 -0.3 1,262,534 + EX28DRAFT_1245 0.51 -2.5 1,262,535 - EX28DRAFT_1245 0.51 -0.2 1,262,535 - EX28DRAFT_1245 0.51 -0.4 1,262,670 + EX28DRAFT_1245 0.61 +0.5 1,262,671 - EX28DRAFT_1245 0.61 -0.5 1,262,671 - EX28DRAFT_1245 0.61 +0.0
Or see this region's nucleotide sequence