Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1133 and EX28DRAFT_1134 are separated by 41 nucleotides EX28DRAFT_1134 and EX28DRAFT_1135 are separated by 40 nucleotides EX28DRAFT_1135 and EX28DRAFT_1136 are separated by 7 nucleotides EX28DRAFT_1136 and EX28DRAFT_1137 are separated by 93 nucleotides
EX28DRAFT_1133: EX28DRAFT_1133 - Protein-disulfide isomerase, at 1,147,891 to 1,148,502
_1133
EX28DRAFT_1134: EX28DRAFT_1134 - Protein-disulfide isomerase, at 1,148,544 to 1,149,302
_1134
EX28DRAFT_1135: EX28DRAFT_1135 - Uncharacterized protein conserved in bacteria, at 1,149,343 to 1,150,635
_1135
EX28DRAFT_1136: EX28DRAFT_1136 - Uncharacterized conserved protein (DUF2132), at 1,150,643 to 1,150,930
_1136
EX28DRAFT_1137: EX28DRAFT_1137 - Beta-galactosidase/beta-glucuronidase, at 1,151,024 to 1,153,195
_1137
Position (kb)
1149
1150
1151 Strain fitness (log2 ratio)
-2
-1
0
1 at 1148.558 kb on - strand at 1148.560 kb on + strand at 1148.561 kb on - strand at 1148.649 kb on - strand, within EX28DRAFT_1134 at 1148.649 kb on - strand, within EX28DRAFT_1134 at 1148.820 kb on + strand, within EX28DRAFT_1134 at 1149.213 kb on + strand, within EX28DRAFT_1134 at 1149.216 kb on + strand, within EX28DRAFT_1134 at 1149.217 kb on - strand, within EX28DRAFT_1134 at 1149.536 kb on + strand, within EX28DRAFT_1135 at 1149.536 kb on + strand, within EX28DRAFT_1135 at 1149.554 kb on + strand, within EX28DRAFT_1135 at 1149.554 kb on + strand, within EX28DRAFT_1135 at 1149.555 kb on - strand, within EX28DRAFT_1135 at 1149.642 kb on - strand, within EX28DRAFT_1135 at 1149.816 kb on + strand, within EX28DRAFT_1135 at 1149.947 kb on + strand, within EX28DRAFT_1135 at 1149.947 kb on + strand, within EX28DRAFT_1135 at 1149.948 kb on - strand, within EX28DRAFT_1135 at 1149.983 kb on + strand, within EX28DRAFT_1135 at 1150.097 kb on + strand, within EX28DRAFT_1135 at 1150.097 kb on + strand, within EX28DRAFT_1135 at 1150.098 kb on - strand, within EX28DRAFT_1135 at 1150.230 kb on + strand, within EX28DRAFT_1135 at 1150.231 kb on - strand, within EX28DRAFT_1135 at 1150.353 kb on + strand, within EX28DRAFT_1135 at 1150.354 kb on - strand, within EX28DRAFT_1135 at 1150.585 kb on + strand at 1150.586 kb on - strand at 1150.621 kb on + strand at 1150.621 kb on + strand at 1150.732 kb on - strand, within EX28DRAFT_1136 at 1150.820 kb on - strand, within EX28DRAFT_1136 at 1150.854 kb on + strand, within EX28DRAFT_1136 at 1150.855 kb on - strand, within EX28DRAFT_1136 at 1150.855 kb on - strand, within EX28DRAFT_1136 at 1150.919 kb on - strand at 1150.930 kb on + strand at 1150.930 kb on + strand at 1150.930 kb on + strand at 1150.931 kb on - strand at 1151.089 kb on + strand at 1151.362 kb on - strand, within EX28DRAFT_1137 at 1151.478 kb on + strand, within EX28DRAFT_1137 at 1151.514 kb on + strand, within EX28DRAFT_1137 at 1151.528 kb on - strand, within EX28DRAFT_1137 at 1151.575 kb on + strand, within EX28DRAFT_1137 at 1151.575 kb on + strand, within EX28DRAFT_1137 at 1151.599 kb on + strand, within EX28DRAFT_1137 at 1151.605 kb on - strand, within EX28DRAFT_1137
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,148,558 - +1.7 1,148,560 + +0.1 1,148,561 - -0.2 1,148,649 - EX28DRAFT_1134 0.14 -0.3 1,148,649 - EX28DRAFT_1134 0.14 +0.5 1,148,820 + EX28DRAFT_1134 0.36 +0.3 1,149,213 + EX28DRAFT_1134 0.88 -0.1 1,149,216 + EX28DRAFT_1134 0.89 -1.3 1,149,217 - EX28DRAFT_1134 0.89 +1.5 1,149,536 + EX28DRAFT_1135 0.15 +0.2 1,149,536 + EX28DRAFT_1135 0.15 +0.3 1,149,554 + EX28DRAFT_1135 0.16 -0.4 1,149,554 + EX28DRAFT_1135 0.16 +0.3 1,149,555 - EX28DRAFT_1135 0.16 -1.2 1,149,642 - EX28DRAFT_1135 0.23 -0.9 1,149,816 + EX28DRAFT_1135 0.37 -1.0 1,149,947 + EX28DRAFT_1135 0.47 -0.8 1,149,947 + EX28DRAFT_1135 0.47 -0.1 1,149,948 - EX28DRAFT_1135 0.47 -0.6 1,149,983 + EX28DRAFT_1135 0.49 -0.3 1,150,097 + EX28DRAFT_1135 0.58 +0.1 1,150,097 + EX28DRAFT_1135 0.58 -0.2 1,150,098 - EX28DRAFT_1135 0.58 -0.0 1,150,230 + EX28DRAFT_1135 0.69 +1.3 1,150,231 - EX28DRAFT_1135 0.69 -0.5 1,150,353 + EX28DRAFT_1135 0.78 +0.3 1,150,354 - EX28DRAFT_1135 0.78 +0.4 1,150,585 + +0.5 1,150,586 - -0.2 1,150,621 + -0.9 1,150,621 + +0.0 1,150,732 - EX28DRAFT_1136 0.31 -0.6 1,150,820 - EX28DRAFT_1136 0.61 -0.3 1,150,854 + EX28DRAFT_1136 0.73 +0.5 1,150,855 - EX28DRAFT_1136 0.74 -0.6 1,150,855 - EX28DRAFT_1136 0.74 -0.0 1,150,919 - -0.2 1,150,930 + +0.1 1,150,930 + +0.1 1,150,930 + -0.3 1,150,931 - +0.9 1,151,089 + -0.0 1,151,362 - EX28DRAFT_1137 0.16 +0.3 1,151,478 + EX28DRAFT_1137 0.21 -0.4 1,151,514 + EX28DRAFT_1137 0.23 +0.1 1,151,528 - EX28DRAFT_1137 0.23 +0.3 1,151,575 + EX28DRAFT_1137 0.25 +0.5 1,151,575 + EX28DRAFT_1137 0.25 -0.9 1,151,599 + EX28DRAFT_1137 0.26 +0.8 1,151,605 - EX28DRAFT_1137 0.27 -2.7
Or see this region's nucleotide sequence