Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0822 and EX28DRAFT_0823 are separated by 274 nucleotides EX28DRAFT_0823 and EX28DRAFT_0824 are separated by 119 nucleotides EX28DRAFT_0824 and EX28DRAFT_0825 overlap by 15 nucleotides
EX28DRAFT_0822: EX28DRAFT_0822 - aminoacyl-tRNA hydrolase, at 826,438 to 827,022
_0822
EX28DRAFT_0823: EX28DRAFT_0823 - Protein of unknown function (DUF2583), at 827,297 to 827,572
_0823
EX28DRAFT_0824: EX28DRAFT_0824 - Predicted transcriptional regulators, at 827,692 to 828,750
_0824
EX28DRAFT_0825: EX28DRAFT_0825 - high affinity sulphate transporter 1, at 828,736 to 830,415
_0825
Position (kb) 827
828
829 Strain fitness (log2 ratio) -2
-1
0
1 at 827.058 kb on - strand at 827.058 kb on - strand at 827.062 kb on + strand at 827.063 kb on - strand at 827.218 kb on + strand at 827.331 kb on + strand, within EX28DRAFT_0823 at 827.394 kb on + strand, within EX28DRAFT_0823 at 827.395 kb on - strand, within EX28DRAFT_0823 at 827.418 kb on - strand, within EX28DRAFT_0823 at 827.513 kb on + strand, within EX28DRAFT_0823 at 827.514 kb on - strand, within EX28DRAFT_0823 at 827.514 kb on - strand, within EX28DRAFT_0823 at 827.560 kb on + strand at 827.570 kb on + strand at 827.691 kb on + strand at 827.692 kb on - strand at 827.756 kb on - strand at 827.972 kb on + strand, within EX28DRAFT_0824 at 827.972 kb on + strand, within EX28DRAFT_0824 at 827.973 kb on - strand, within EX28DRAFT_0824 at 827.973 kb on - strand, within EX28DRAFT_0824 at 827.973 kb on - strand, within EX28DRAFT_0824 at 827.976 kb on + strand, within EX28DRAFT_0824 at 827.977 kb on - strand, within EX28DRAFT_0824 at 828.065 kb on + strand, within EX28DRAFT_0824 at 828.065 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.072 kb on + strand, within EX28DRAFT_0824 at 828.073 kb on - strand, within EX28DRAFT_0824 at 828.073 kb on - strand, within EX28DRAFT_0824 at 828.073 kb on - strand, within EX28DRAFT_0824 at 828.076 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.195 kb on + strand, within EX28DRAFT_0824 at 828.196 kb on - strand, within EX28DRAFT_0824 at 828.388 kb on - strand, within EX28DRAFT_0824 at 828.398 kb on + strand, within EX28DRAFT_0824 at 828.399 kb on - strand, within EX28DRAFT_0824 at 828.409 kb on + strand, within EX28DRAFT_0824 at 828.409 kb on + strand, within EX28DRAFT_0824 at 828.410 kb on - strand, within EX28DRAFT_0824 at 828.410 kb on - strand, within EX28DRAFT_0824 at 828.448 kb on + strand, within EX28DRAFT_0824 at 828.491 kb on + strand, within EX28DRAFT_0824 at 828.578 kb on - strand, within EX28DRAFT_0824 at 828.770 kb on + strand at 828.771 kb on - strand at 829.426 kb on - strand, within EX28DRAFT_0825 at 829.563 kb on + strand, within EX28DRAFT_0825 at 829.701 kb on - strand, within EX28DRAFT_0825 at 829.744 kb on - strand, within EX28DRAFT_0825
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 827,058 - -0.2 827,058 - -0.5 827,062 + +0.5 827,063 - +0.5 827,218 + -1.1 827,331 + EX28DRAFT_0823 0.12 -0.3 827,394 + EX28DRAFT_0823 0.35 -0.0 827,395 - EX28DRAFT_0823 0.36 +0.2 827,418 - EX28DRAFT_0823 0.44 +0.6 827,513 + EX28DRAFT_0823 0.78 +0.4 827,514 - EX28DRAFT_0823 0.79 +0.1 827,514 - EX28DRAFT_0823 0.79 +1.7 827,560 + +0.1 827,570 + +0.2 827,691 + -0.3 827,692 - -0.7 827,756 - +0.0 827,972 + EX28DRAFT_0824 0.26 -0.3 827,972 + EX28DRAFT_0824 0.26 -0.4 827,973 - EX28DRAFT_0824 0.27 -0.6 827,973 - EX28DRAFT_0824 0.27 +0.1 827,973 - EX28DRAFT_0824 0.27 +0.3 827,976 + EX28DRAFT_0824 0.27 -0.5 827,977 - EX28DRAFT_0824 0.27 -2.5 828,065 + EX28DRAFT_0824 0.35 +0.1 828,065 + EX28DRAFT_0824 0.35 +0.4 828,072 + EX28DRAFT_0824 0.36 +0.1 828,072 + EX28DRAFT_0824 0.36 +0.2 828,072 + EX28DRAFT_0824 0.36 -1.0 828,072 + EX28DRAFT_0824 0.36 -0.6 828,072 + EX28DRAFT_0824 0.36 -0.1 828,073 - EX28DRAFT_0824 0.36 -0.0 828,073 - EX28DRAFT_0824 0.36 -0.4 828,073 - EX28DRAFT_0824 0.36 +0.1 828,076 + EX28DRAFT_0824 0.36 -0.2 828,195 + EX28DRAFT_0824 0.47 +0.4 828,195 + EX28DRAFT_0824 0.47 -0.0 828,195 + EX28DRAFT_0824 0.47 -1.6 828,195 + EX28DRAFT_0824 0.47 +0.6 828,195 + EX28DRAFT_0824 0.47 -1.2 828,196 - EX28DRAFT_0824 0.48 +0.1 828,388 - EX28DRAFT_0824 0.66 -0.1 828,398 + EX28DRAFT_0824 0.67 +0.4 828,399 - EX28DRAFT_0824 0.67 -0.1 828,409 + EX28DRAFT_0824 0.68 +0.7 828,409 + EX28DRAFT_0824 0.68 -0.3 828,410 - EX28DRAFT_0824 0.68 -1.2 828,410 - EX28DRAFT_0824 0.68 -0.1 828,448 + EX28DRAFT_0824 0.71 -0.9 828,491 + EX28DRAFT_0824 0.75 +0.3 828,578 - EX28DRAFT_0824 0.84 -0.2 828,770 + +0.4 828,771 - -0.5 829,426 - EX28DRAFT_0825 0.41 +0.3 829,563 + EX28DRAFT_0825 0.49 -0.4 829,701 - EX28DRAFT_0825 0.57 +0.8 829,744 - EX28DRAFT_0825 0.60 +0.7
Or see this region's nucleotide sequence