Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0419 and EX28DRAFT_0420 are separated by 137 nucleotides EX28DRAFT_0420 and EX28DRAFT_0421 are separated by 12 nucleotides
EX28DRAFT_0419: EX28DRAFT_0419 - transcriptional antiterminator, BglG family, at 397,062 to 397,895
_0419
EX28DRAFT_0420: EX28DRAFT_0420 - PTS system, beta-glucoside-specific IIABC component, at 398,033 to 399,886
_0420
EX28DRAFT_0421: EX28DRAFT_0421 - Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase, at 399,899 to 401,293
_0421
Position (kb) 398
399
400 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 397.078 kb on + strand at 397.085 kb on + strand at 397.211 kb on - strand, within EX28DRAFT_0419 at 397.338 kb on + strand, within EX28DRAFT_0419 at 397.338 kb on + strand, within EX28DRAFT_0419 at 397.339 kb on - strand, within EX28DRAFT_0419 at 397.339 kb on - strand, within EX28DRAFT_0419 at 397.339 kb on - strand, within EX28DRAFT_0419 at 397.340 kb on + strand, within EX28DRAFT_0419 at 397.341 kb on - strand, within EX28DRAFT_0419 at 397.362 kb on + strand, within EX28DRAFT_0419 at 397.362 kb on + strand, within EX28DRAFT_0419 at 397.425 kb on - strand, within EX28DRAFT_0419 at 397.620 kb on + strand, within EX28DRAFT_0419 at 397.621 kb on - strand, within EX28DRAFT_0419 at 397.638 kb on + strand, within EX28DRAFT_0419 at 397.638 kb on + strand, within EX28DRAFT_0419 at 397.659 kb on + strand, within EX28DRAFT_0419 at 397.764 kb on + strand, within EX28DRAFT_0419 at 397.765 kb on - strand, within EX28DRAFT_0419 at 397.847 kb on + strand at 397.847 kb on + strand at 397.847 kb on + strand at 397.848 kb on - strand at 397.848 kb on - strand at 397.865 kb on + strand at 397.866 kb on - strand at 397.984 kb on + strand at 397.985 kb on - strand at 397.985 kb on - strand at 397.987 kb on - strand at 398.104 kb on - strand at 398.104 kb on - strand at 398.459 kb on + strand, within EX28DRAFT_0420 at 398.460 kb on - strand, within EX28DRAFT_0420 at 398.555 kb on - strand, within EX28DRAFT_0420 at 398.555 kb on - strand, within EX28DRAFT_0420 at 398.557 kb on + strand, within EX28DRAFT_0420 at 398.671 kb on + strand, within EX28DRAFT_0420 at 398.676 kb on - strand, within EX28DRAFT_0420 at 398.878 kb on + strand, within EX28DRAFT_0420 at 398.882 kb on + strand, within EX28DRAFT_0420 at 398.882 kb on + strand, within EX28DRAFT_0420 at 398.883 kb on - strand, within EX28DRAFT_0420 at 398.980 kb on + strand, within EX28DRAFT_0420 at 398.981 kb on - strand, within EX28DRAFT_0420 at 399.130 kb on - strand, within EX28DRAFT_0420 at 399.163 kb on - strand, within EX28DRAFT_0420 at 399.163 kb on - strand, within EX28DRAFT_0420 at 399.187 kb on + strand, within EX28DRAFT_0420 at 399.187 kb on + strand, within EX28DRAFT_0420 at 399.252 kb on - strand, within EX28DRAFT_0420 at 399.444 kb on + strand, within EX28DRAFT_0420 at 399.533 kb on - strand, within EX28DRAFT_0420 at 399.793 kb on + strand at 399.794 kb on - strand at 400.082 kb on + strand, within EX28DRAFT_0421 at 400.129 kb on + strand, within EX28DRAFT_0421 at 400.130 kb on - strand, within EX28DRAFT_0421 at 400.215 kb on - strand, within EX28DRAFT_0421 at 400.307 kb on + strand, within EX28DRAFT_0421 at 400.377 kb on - strand, within EX28DRAFT_0421 at 400.378 kb on + strand, within EX28DRAFT_0421 at 400.379 kb on - strand, within EX28DRAFT_0421 at 400.420 kb on + strand, within EX28DRAFT_0421 at 400.420 kb on + strand, within EX28DRAFT_0421 at 400.420 kb on + strand, within EX28DRAFT_0421 at 400.420 kb on + strand, within EX28DRAFT_0421 at 400.420 kb on + strand, within EX28DRAFT_0421 at 400.421 kb on - strand, within EX28DRAFT_0421 at 400.421 kb on - strand, within EX28DRAFT_0421 at 400.471 kb on + strand, within EX28DRAFT_0421 at 400.484 kb on + strand, within EX28DRAFT_0421 at 400.570 kb on + strand, within EX28DRAFT_0421 at 400.570 kb on + strand, within EX28DRAFT_0421 at 400.571 kb on - strand, within EX28DRAFT_0421 at 400.571 kb on - strand, within EX28DRAFT_0421 at 400.593 kb on - strand, within EX28DRAFT_0421 at 400.621 kb on - strand, within EX28DRAFT_0421 at 400.695 kb on - strand, within EX28DRAFT_0421 at 400.696 kb on + strand, within EX28DRAFT_0421 at 400.697 kb on - strand, within EX28DRAFT_0421 at 400.797 kb on - strand, within EX28DRAFT_0421 at 400.797 kb on - strand, within EX28DRAFT_0421
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 397,078 + +1.0 397,085 + +0.4 397,211 - EX28DRAFT_0419 0.18 +0.3 397,338 + EX28DRAFT_0419 0.33 -0.1 397,338 + EX28DRAFT_0419 0.33 +0.2 397,339 - EX28DRAFT_0419 0.33 +0.6 397,339 - EX28DRAFT_0419 0.33 -0.5 397,339 - EX28DRAFT_0419 0.33 -0.2 397,340 + EX28DRAFT_0419 0.33 +1.3 397,341 - EX28DRAFT_0419 0.33 +0.2 397,362 + EX28DRAFT_0419 0.36 +0.5 397,362 + EX28DRAFT_0419 0.36 +0.5 397,425 - EX28DRAFT_0419 0.44 +0.6 397,620 + EX28DRAFT_0419 0.67 -0.2 397,621 - EX28DRAFT_0419 0.67 +0.5 397,638 + EX28DRAFT_0419 0.69 +0.7 397,638 + EX28DRAFT_0419 0.69 +0.3 397,659 + EX28DRAFT_0419 0.72 -0.9 397,764 + EX28DRAFT_0419 0.84 +0.0 397,765 - EX28DRAFT_0419 0.84 -0.2 397,847 + +0.3 397,847 + -0.6 397,847 + -0.2 397,848 - +1.4 397,848 - -2.5 397,865 + +1.1 397,866 - +1.0 397,984 + +1.6 397,985 - +0.3 397,985 - +0.1 397,987 - +0.2 398,104 - -0.1 398,104 - -0.2 398,459 + EX28DRAFT_0420 0.23 -0.0 398,460 - EX28DRAFT_0420 0.23 +0.1 398,555 - EX28DRAFT_0420 0.28 -2.1 398,555 - EX28DRAFT_0420 0.28 -0.4 398,557 + EX28DRAFT_0420 0.28 -0.4 398,671 + EX28DRAFT_0420 0.34 +1.1 398,676 - EX28DRAFT_0420 0.35 -0.3 398,878 + EX28DRAFT_0420 0.46 -3.9 398,882 + EX28DRAFT_0420 0.46 +1.8 398,882 + EX28DRAFT_0420 0.46 +0.3 398,883 - EX28DRAFT_0420 0.46 +0.9 398,980 + EX28DRAFT_0420 0.51 +0.2 398,981 - EX28DRAFT_0420 0.51 +1.1 399,130 - EX28DRAFT_0420 0.59 +0.6 399,163 - EX28DRAFT_0420 0.61 +0.9 399,163 - EX28DRAFT_0420 0.61 -0.2 399,187 + EX28DRAFT_0420 0.62 +0.2 399,187 + EX28DRAFT_0420 0.62 +0.4 399,252 - EX28DRAFT_0420 0.66 +0.3 399,444 + EX28DRAFT_0420 0.76 -0.1 399,533 - EX28DRAFT_0420 0.81 +0.1 399,793 + +0.1 399,794 - +0.1 400,082 + EX28DRAFT_0421 0.13 +0.0 400,129 + EX28DRAFT_0421 0.16 +0.2 400,130 - EX28DRAFT_0421 0.17 -0.3 400,215 - EX28DRAFT_0421 0.23 -0.4 400,307 + EX28DRAFT_0421 0.29 +1.1 400,377 - EX28DRAFT_0421 0.34 -0.9 400,378 + EX28DRAFT_0421 0.34 -1.1 400,379 - EX28DRAFT_0421 0.34 -0.6 400,420 + EX28DRAFT_0421 0.37 -0.5 400,420 + EX28DRAFT_0421 0.37 -0.1 400,420 + EX28DRAFT_0421 0.37 -0.2 400,420 + EX28DRAFT_0421 0.37 -0.3 400,420 + EX28DRAFT_0421 0.37 +0.0 400,421 - EX28DRAFT_0421 0.37 +0.1 400,421 - EX28DRAFT_0421 0.37 +0.1 400,471 + EX28DRAFT_0421 0.41 +0.1 400,484 + EX28DRAFT_0421 0.42 -0.6 400,570 + EX28DRAFT_0421 0.48 +0.3 400,570 + EX28DRAFT_0421 0.48 +0.3 400,571 - EX28DRAFT_0421 0.48 +0.3 400,571 - EX28DRAFT_0421 0.48 +1.7 400,593 - EX28DRAFT_0421 0.50 +0.1 400,621 - EX28DRAFT_0421 0.52 +1.3 400,695 - EX28DRAFT_0421 0.57 +0.1 400,696 + EX28DRAFT_0421 0.57 +0.2 400,697 - EX28DRAFT_0421 0.57 -0.1 400,797 - EX28DRAFT_0421 0.64 -1.6 400,797 - EX28DRAFT_0421 0.64 -0.7
Or see this region's nucleotide sequence