Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0252 and EX28DRAFT_0253 are separated by 415 nucleotides EX28DRAFT_0253 and EX28DRAFT_0254 are separated by 29 nucleotides EX28DRAFT_0254 and EX28DRAFT_0255 are separated by 247 nucleotides
EX28DRAFT_0252: EX28DRAFT_0252 - hypothetical protein, at 211,156 to 212,118
_0252
EX28DRAFT_0253: EX28DRAFT_0253 - hypothetical protein, at 212,534 to 213,403
_0253
EX28DRAFT_0254: EX28DRAFT_0254 - hypothetical protein, at 213,433 to 213,651
_0254
EX28DRAFT_0255: EX28DRAFT_0255 - Domain of unknown function (DUF4123), at 213,899 to 214,714
_0255
Position (kb) 212
213
214 Strain fitness (log2 ratio) -1
0
1
2
3 at 211.592 kb on + strand, within EX28DRAFT_0252 at 211.593 kb on - strand, within EX28DRAFT_0252 at 211.625 kb on - strand, within EX28DRAFT_0252 at 211.634 kb on - strand, within EX28DRAFT_0252 at 211.634 kb on - strand, within EX28DRAFT_0252 at 211.664 kb on + strand, within EX28DRAFT_0252 at 211.665 kb on - strand, within EX28DRAFT_0252 at 211.670 kb on + strand, within EX28DRAFT_0252 at 211.671 kb on - strand, within EX28DRAFT_0252 at 211.831 kb on + strand, within EX28DRAFT_0252 at 211.843 kb on + strand, within EX28DRAFT_0252 at 211.903 kb on - strand, within EX28DRAFT_0252 at 212.220 kb on + strand at 212.246 kb on + strand at 212.272 kb on + strand at 212.351 kb on - strand at 212.351 kb on - strand at 212.469 kb on + strand at 212.634 kb on - strand, within EX28DRAFT_0253 at 212.805 kb on - strand, within EX28DRAFT_0253 at 212.821 kb on + strand, within EX28DRAFT_0253 at 212.912 kb on + strand, within EX28DRAFT_0253 at 212.958 kb on + strand, within EX28DRAFT_0253 at 212.958 kb on + strand, within EX28DRAFT_0253 at 212.959 kb on - strand, within EX28DRAFT_0253 at 212.974 kb on + strand, within EX28DRAFT_0253 at 212.993 kb on - strand, within EX28DRAFT_0253 at 213.014 kb on - strand, within EX28DRAFT_0253 at 213.024 kb on + strand, within EX28DRAFT_0253 at 213.031 kb on + strand, within EX28DRAFT_0253 at 213.033 kb on + strand, within EX28DRAFT_0253 at 213.584 kb on + strand, within EX28DRAFT_0254 at 214.145 kb on - strand, within EX28DRAFT_0255
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 211,592 + EX28DRAFT_0252 0.45 +0.6 211,593 - EX28DRAFT_0252 0.45 +0.3 211,625 - EX28DRAFT_0252 0.49 +1.5 211,634 - EX28DRAFT_0252 0.50 -0.1 211,634 - EX28DRAFT_0252 0.50 +0.9 211,664 + EX28DRAFT_0252 0.53 +3.7 211,665 - EX28DRAFT_0252 0.53 -1.7 211,670 + EX28DRAFT_0252 0.53 -1.2 211,671 - EX28DRAFT_0252 0.53 -0.4 211,831 + EX28DRAFT_0252 0.70 -0.1 211,843 + EX28DRAFT_0252 0.71 -0.2 211,903 - EX28DRAFT_0252 0.78 +0.0 212,220 + +0.1 212,246 + +0.0 212,272 + +0.5 212,351 - +0.5 212,351 - +0.4 212,469 + +0.6 212,634 - EX28DRAFT_0253 0.11 -0.7 212,805 - EX28DRAFT_0253 0.31 +0.6 212,821 + EX28DRAFT_0253 0.33 +0.7 212,912 + EX28DRAFT_0253 0.43 -0.9 212,958 + EX28DRAFT_0253 0.49 -0.7 212,958 + EX28DRAFT_0253 0.49 +0.5 212,959 - EX28DRAFT_0253 0.49 -0.3 212,974 + EX28DRAFT_0253 0.51 -0.1 212,993 - EX28DRAFT_0253 0.53 -0.2 213,014 - EX28DRAFT_0253 0.55 -1.2 213,024 + EX28DRAFT_0253 0.56 -0.3 213,031 + EX28DRAFT_0253 0.57 -0.1 213,033 + EX28DRAFT_0253 0.57 -0.4 213,584 + EX28DRAFT_0254 0.69 -0.2 214,145 - EX28DRAFT_0255 0.30 -0.1
Or see this region's nucleotide sequence