Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0239 and EX28DRAFT_0240 are separated by 386 nucleotides EX28DRAFT_0240 and EX28DRAFT_0241 are separated by 482 nucleotides
EX28DRAFT_0239: EX28DRAFT_0239 - Putative regulator of cell autolysis, at 191,018 to 192,724
_0239
EX28DRAFT_0240: EX28DRAFT_0240 - Aspartate/tyrosine/aromatic aminotransferase, at 193,111 to 194,349
_0240
EX28DRAFT_0241: EX28DRAFT_0241 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase, at 194,832 to 195,749
_0241
Position (kb) 193
194
195 Strain fitness (log2 ratio) -1
0
1 at 192.528 kb on - strand, within EX28DRAFT_0239 at 192.713 kb on + strand at 192.713 kb on + strand at 192.728 kb on + strand at 192.729 kb on - strand at 192.901 kb on - strand at 192.916 kb on - strand at 193.166 kb on - strand at 193.176 kb on + strand at 193.269 kb on + strand, within EX28DRAFT_0240 at 193.270 kb on - strand, within EX28DRAFT_0240 at 193.292 kb on + strand, within EX28DRAFT_0240 at 193.347 kb on - strand, within EX28DRAFT_0240 at 193.520 kb on - strand, within EX28DRAFT_0240 at 193.820 kb on + strand, within EX28DRAFT_0240 at 193.867 kb on - strand, within EX28DRAFT_0240 at 193.875 kb on + strand, within EX28DRAFT_0240 at 193.875 kb on + strand, within EX28DRAFT_0240 at 193.925 kb on - strand, within EX28DRAFT_0240 at 193.938 kb on + strand, within EX28DRAFT_0240 at 194.018 kb on - strand, within EX28DRAFT_0240 at 194.019 kb on + strand, within EX28DRAFT_0240 at 194.019 kb on + strand, within EX28DRAFT_0240 at 194.020 kb on - strand, within EX28DRAFT_0240 at 194.095 kb on + strand, within EX28DRAFT_0240 at 194.096 kb on - strand, within EX28DRAFT_0240 at 194.096 kb on - strand, within EX28DRAFT_0240 at 194.122 kb on + strand, within EX28DRAFT_0240 at 194.122 kb on + strand, within EX28DRAFT_0240 at 194.123 kb on - strand, within EX28DRAFT_0240 at 194.403 kb on + strand at 194.435 kb on + strand at 194.436 kb on - strand at 194.508 kb on + strand at 194.508 kb on + strand at 194.531 kb on + strand at 194.634 kb on + strand at 194.767 kb on + strand at 194.893 kb on + strand at 194.971 kb on + strand, within EX28DRAFT_0241 at 195.015 kb on - strand, within EX28DRAFT_0241 at 195.138 kb on - strand, within EX28DRAFT_0241 at 195.138 kb on - strand, within EX28DRAFT_0241 at 195.145 kb on + strand, within EX28DRAFT_0241 at 195.216 kb on - strand, within EX28DRAFT_0241 at 195.273 kb on - strand, within EX28DRAFT_0241 at 195.295 kb on + strand, within EX28DRAFT_0241 at 195.296 kb on - strand, within EX28DRAFT_0241 at 195.296 kb on - strand, within EX28DRAFT_0241
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 192,528 - EX28DRAFT_0239 0.88 -0.5 192,713 + -0.0 192,713 + +0.4 192,728 + -0.3 192,729 - +0.5 192,901 - +0.3 192,916 - +0.1 193,166 - -0.2 193,176 + +0.7 193,269 + EX28DRAFT_0240 0.13 +0.2 193,270 - EX28DRAFT_0240 0.13 +0.2 193,292 + EX28DRAFT_0240 0.15 -0.1 193,347 - EX28DRAFT_0240 0.19 -0.4 193,520 - EX28DRAFT_0240 0.33 -1.4 193,820 + EX28DRAFT_0240 0.57 -0.2 193,867 - EX28DRAFT_0240 0.61 +0.2 193,875 + EX28DRAFT_0240 0.62 +0.2 193,875 + EX28DRAFT_0240 0.62 -0.2 193,925 - EX28DRAFT_0240 0.66 -0.6 193,938 + EX28DRAFT_0240 0.67 -1.5 194,018 - EX28DRAFT_0240 0.73 -0.1 194,019 + EX28DRAFT_0240 0.73 +0.4 194,019 + EX28DRAFT_0240 0.73 +0.1 194,020 - EX28DRAFT_0240 0.73 -0.2 194,095 + EX28DRAFT_0240 0.79 +0.7 194,096 - EX28DRAFT_0240 0.79 -0.9 194,096 - EX28DRAFT_0240 0.79 +0.0 194,122 + EX28DRAFT_0240 0.82 -1.5 194,122 + EX28DRAFT_0240 0.82 -0.4 194,123 - EX28DRAFT_0240 0.82 +0.4 194,403 + -1.2 194,435 + +0.9 194,436 - -0.1 194,508 + +1.0 194,508 + -0.1 194,531 + -0.1 194,634 + +0.1 194,767 + -0.0 194,893 + -0.1 194,971 + EX28DRAFT_0241 0.15 +0.3 195,015 - EX28DRAFT_0241 0.20 -0.6 195,138 - EX28DRAFT_0241 0.33 -0.4 195,138 - EX28DRAFT_0241 0.33 -0.2 195,145 + EX28DRAFT_0241 0.34 -0.2 195,216 - EX28DRAFT_0241 0.42 -1.2 195,273 - EX28DRAFT_0241 0.48 -0.2 195,295 + EX28DRAFT_0241 0.50 +0.1 195,296 - EX28DRAFT_0241 0.51 +0.7 195,296 - EX28DRAFT_0241 0.51 +1.3
Or see this region's nucleotide sequence