Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0152 and EX28DRAFT_0153 are separated by 8 nucleotides EX28DRAFT_0153 and EX28DRAFT_0154 are separated by 12 nucleotides
EX28DRAFT_0152: EX28DRAFT_0152 - Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components, at 98,401 to 99,429
_0152
EX28DRAFT_0153: EX28DRAFT_0153 - Predicted dehydrogenases and related proteins, at 99,438 to 100,571
_0153
EX28DRAFT_0154: EX28DRAFT_0154 - Uncharacterized protein conserved in bacteria, at 100,584 to 102,488
_0154
Position (kb) 99
100
101 Strain fitness (log2 ratio) -1
0
1
2 at 98.556 kb on + strand, within EX28DRAFT_0152 at 98.587 kb on + strand, within EX28DRAFT_0152 at 98.686 kb on + strand, within EX28DRAFT_0152 at 98.964 kb on + strand, within EX28DRAFT_0152 at 98.965 kb on - strand, within EX28DRAFT_0152 at 98.970 kb on + strand, within EX28DRAFT_0152 at 99.044 kb on - strand, within EX28DRAFT_0152 at 99.116 kb on - strand, within EX28DRAFT_0152 at 99.344 kb on - strand at 99.346 kb on + strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.369 kb on - strand at 99.373 kb on - strand at 99.396 kb on + strand at 99.400 kb on + strand at 99.401 kb on - strand at 99.401 kb on - strand at 99.452 kb on + strand at 99.460 kb on + strand at 99.475 kb on - strand at 99.502 kb on - strand at 99.668 kb on + strand, within EX28DRAFT_0153 at 99.736 kb on - strand, within EX28DRAFT_0153 at 99.831 kb on + strand, within EX28DRAFT_0153 at 99.831 kb on + strand, within EX28DRAFT_0153 at 99.832 kb on - strand, within EX28DRAFT_0153 at 99.832 kb on - strand, within EX28DRAFT_0153 at 99.832 kb on - strand, within EX28DRAFT_0153 at 99.927 kb on + strand, within EX28DRAFT_0153 at 99.927 kb on + strand, within EX28DRAFT_0153 at 99.927 kb on + strand, within EX28DRAFT_0153 at 99.927 kb on + strand, within EX28DRAFT_0153 at 99.927 kb on + strand, within EX28DRAFT_0153 at 99.927 kb on + strand, within EX28DRAFT_0153 at 99.928 kb on - strand, within EX28DRAFT_0153 at 99.928 kb on - strand, within EX28DRAFT_0153 at 99.928 kb on - strand, within EX28DRAFT_0153 at 99.930 kb on - strand, within EX28DRAFT_0153 at 100.231 kb on - strand, within EX28DRAFT_0153 at 100.231 kb on - strand, within EX28DRAFT_0153 at 100.296 kb on + strand, within EX28DRAFT_0153 at 100.296 kb on + strand, within EX28DRAFT_0153 at 100.297 kb on - strand, within EX28DRAFT_0153 at 100.577 kb on + strand at 100.636 kb on - strand at 100.636 kb on - strand at 100.775 kb on + strand, within EX28DRAFT_0154 at 100.775 kb on + strand, within EX28DRAFT_0154 at 100.775 kb on + strand, within EX28DRAFT_0154 at 100.776 kb on - strand, within EX28DRAFT_0154 at 100.776 kb on - strand, within EX28DRAFT_0154 at 100.776 kb on - strand, within EX28DRAFT_0154 at 100.962 kb on + strand, within EX28DRAFT_0154 at 100.962 kb on + strand, within EX28DRAFT_0154 at 100.962 kb on + strand, within EX28DRAFT_0154 at 100.963 kb on - strand, within EX28DRAFT_0154 at 100.963 kb on - strand, within EX28DRAFT_0154 at 100.963 kb on - strand, within EX28DRAFT_0154 at 100.963 kb on - strand, within EX28DRAFT_0154 at 101.050 kb on - strand, within EX28DRAFT_0154 at 101.050 kb on - strand, within EX28DRAFT_0154 at 101.068 kb on + strand, within EX28DRAFT_0154 at 101.123 kb on - strand, within EX28DRAFT_0154
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 98,556 + EX28DRAFT_0152 0.15 +0.3 98,587 + EX28DRAFT_0152 0.18 -0.2 98,686 + EX28DRAFT_0152 0.28 -0.1 98,964 + EX28DRAFT_0152 0.55 +0.7 98,965 - EX28DRAFT_0152 0.55 -0.4 98,970 + EX28DRAFT_0152 0.55 +0.9 99,044 - EX28DRAFT_0152 0.62 -0.2 99,116 - EX28DRAFT_0152 0.69 -0.1 99,344 - -0.4 99,346 + -0.1 99,369 - +0.1 99,369 - +0.2 99,369 - -0.9 99,373 - +0.0 99,396 + +0.3 99,400 + -0.4 99,401 - -0.3 99,401 - +0.2 99,452 + +0.3 99,460 + -1.1 99,475 - +0.0 99,502 - +0.1 99,668 + EX28DRAFT_0153 0.20 -0.6 99,736 - EX28DRAFT_0153 0.26 -1.2 99,831 + EX28DRAFT_0153 0.35 -0.6 99,831 + EX28DRAFT_0153 0.35 -0.2 99,832 - EX28DRAFT_0153 0.35 +2.1 99,832 - EX28DRAFT_0153 0.35 +0.5 99,832 - EX28DRAFT_0153 0.35 +0.5 99,927 + EX28DRAFT_0153 0.43 -0.1 99,927 + EX28DRAFT_0153 0.43 +0.6 99,927 + EX28DRAFT_0153 0.43 +0.2 99,927 + EX28DRAFT_0153 0.43 -1.0 99,927 + EX28DRAFT_0153 0.43 +0.2 99,927 + EX28DRAFT_0153 0.43 -0.0 99,928 - EX28DRAFT_0153 0.43 -0.0 99,928 - EX28DRAFT_0153 0.43 +0.8 99,928 - EX28DRAFT_0153 0.43 +0.8 99,930 - EX28DRAFT_0153 0.43 -0.1 100,231 - EX28DRAFT_0153 0.70 -0.0 100,231 - EX28DRAFT_0153 0.70 +0.0 100,296 + EX28DRAFT_0153 0.76 -0.2 100,296 + EX28DRAFT_0153 0.76 -0.2 100,297 - EX28DRAFT_0153 0.76 +0.4 100,577 + +1.9 100,636 - +0.4 100,636 - -0.2 100,775 + EX28DRAFT_0154 0.10 +0.3 100,775 + EX28DRAFT_0154 0.10 -0.7 100,775 + EX28DRAFT_0154 0.10 -0.1 100,776 - EX28DRAFT_0154 0.10 -0.0 100,776 - EX28DRAFT_0154 0.10 -0.3 100,776 - EX28DRAFT_0154 0.10 -0.1 100,962 + EX28DRAFT_0154 0.20 -0.0 100,962 + EX28DRAFT_0154 0.20 -0.1 100,962 + EX28DRAFT_0154 0.20 +0.4 100,963 - EX28DRAFT_0154 0.20 -0.4 100,963 - EX28DRAFT_0154 0.20 +0.4 100,963 - EX28DRAFT_0154 0.20 +0.9 100,963 - EX28DRAFT_0154 0.20 +0.2 101,050 - EX28DRAFT_0154 0.24 -0.4 101,050 - EX28DRAFT_0154 0.24 +0.6 101,068 + EX28DRAFT_0154 0.25 -0.0 101,123 - EX28DRAFT_0154 0.28 -1.0
Or see this region's nucleotide sequence