Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03883

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,124,588	-		CCNA_02967	0.75	+0.3
3,124,599	+		CCNA_02967	0.76	-1.8
3,124,653	+		CCNA_02967	0.78	+0.2
3,124,653	+		CCNA_02967	0.78	-0.4
3,124,661	-		CCNA_02967	0.78	-0.6
3,124,661	-		CCNA_02967	0.78	-0.1
3,124,661	-		CCNA_02967	0.78	+0.9
3,124,669	+		CCNA_02967	0.79	-0.2
3,124,672	-		CCNA_02967	0.79	+0.4
3,124,678	-		CCNA_02967	0.79	-1.8
3,124,680	-		CCNA_02967	0.79	+0.9
3,124,698	+		CCNA_02967	0.80	+0.0
3,124,706	-		CCNA_02967	0.80	+0.6
3,124,807	-		CCNA_02967	0.84	+0.1
3,124,845	-		CCNA_02967	0.86	-0.2
3,124,867	+		CCNA_02967	0.87	+1.2
3,124,887	+		CCNA_02967	0.88	+0.6
3,124,887	+		CCNA_02967	0.88	-0.4
3,124,938	+		CCNA_02967	0.90	-1.2
3,124,948	+				-0.2
3,125,012	-				+0.2
3,125,012	-				+0.2
3,125,066	+				+0.5
3,125,081	+				+0.6
3,125,081	+				-0.7
3,125,147	+				+0.2
3,125,172	-				-0.4
3,125,187	+				-0.3
3,125,195	-				+0.1
3,125,195	-				-0.3
3,125,219	-				-0.3
3,125,229	-				+0.3
3,125,242	-				-1.1
3,125,242	-				-0.3
3,125,242	-				-0.3
3,125,244	-				+0.4
3,125,278	-		CCNA_03902	0.12	-0.8
3,125,302	+		CCNA_03902	0.19	-1.1
3,125,321	+		CCNA_03902	0.25	-0.4
3,125,334	-		CCNA_03902	0.29	+0.5
3,125,354	-		CCNA_03902	0.35	+0.0
3,125,355	-		CCNA_03902	0.35	-0.3
3,125,355	-		CCNA_03902	0.35	-0.7
3,125,355	-		CCNA_03902	0.35	-2.2
3,125,355	-		CCNA_03902	0.35	+0.2
3,125,399	-		CCNA_03902	0.48	+0.5
3,125,408	+		CCNA_03902	0.51	-0.0
3,125,443	+		CCNA_03902	0.61	+0.8
3,125,446	-		CCNA_03902	0.62	-0.8
3,125,446	-		CCNA_03902	0.62	+0.7
3,125,446	-		CCNA_03902	0.62	+0.8
3,125,451	-		CCNA_03902	0.63	-0.6
3,125,517	+		CCNA_03902	0.83	-0.9
3,125,542	-				-0.5
3,125,552	-				-0.1
3,125,552	-				+2.2
3,125,584	+				-0.9
3,125,588	-				-0.0
3,125,631	+		CCNA_03883	0.15	+1.1
3,125,663	-		CCNA_03883	0.22	-0.7
3,125,674	+		CCNA_03883	0.25	-0.3
3,125,760	+		CCNA_03883	0.46	+1.1
3,125,760	+		CCNA_03883	0.46	-0.5
3,125,768	-		CCNA_03883	0.47	+0.9
3,125,784	-		CCNA_03883	0.51	+1.5
3,125,797	+		CCNA_03883	0.54	+0.6
3,125,845	+		CCNA_03883	0.66	-1.9
3,125,852	+		CCNA_03883	0.68	+0.3
3,125,853	-		CCNA_03883	0.68	+0.1
3,125,874	-		CCNA_03883	0.73	+0.5
3,125,898	+		CCNA_03883	0.79	-0.2
3,125,898	+		CCNA_03883	0.79	-1.8
3,125,901	-		CCNA_03883	0.79	-0.6
3,125,939	+		CCNA_03883	0.88	-1.8
3,125,939	+		CCNA_03883	0.88	+0.8
3,125,939	+		CCNA_03883	0.88	+0.1
3,125,939	+		CCNA_03883	0.88	+0.3
3,125,939	+		CCNA_03883	0.88	+1.6
3,125,939	+		CCNA_03883	0.88	+0.1
3,125,944	+		CCNA_03883	0.90	+0.8
3,125,947	-				-0.3
3,125,947	-				-0.3
3,125,947	-				-0.2
3,125,947	-				-1.1
3,125,947	-				+1.2
3,125,947	-				-0.4
3,125,947	-				-0.4
3,125,947	-				-0.7
3,125,947	-				+0.4
3,125,947	-				+0.8
3,126,053	+				+0.9
3,126,073	-				+0.3
3,126,089	+				+0.5
3,126,089	+				-0.0
3,126,089	+				+0.6
3,126,097	-				-0.9
3,126,129	-		CCNA_02969	0.13	-0.5
3,126,181	+		CCNA_02969	0.23	+0.4
3,126,194	-		CCNA_02969	0.25	-0.1
3,126,226	+		CCNA_02969	0.31	+0.4
3,126,231	-		CCNA_02969	0.32	+1.6
3,126,258	+		CCNA_02969	0.37	+1.1
3,126,258	+		CCNA_02969	0.37	+0.4
3,126,266	-		CCNA_02969	0.38	-1.9
3,126,266	-		CCNA_02969	0.38	+0.1
3,126,266	-		CCNA_02969	0.38	-0.5
3,126,266	-		CCNA_02969	0.38	+0.6
3,126,317	-		CCNA_02969	0.47	+0.7
3,126,360	+		CCNA_02969	0.55	-0.3
3,126,373	-		CCNA_02969	0.57	-1.5
3,126,410	+		CCNA_02969	0.64	-0.1
3,126,413	-		CCNA_02969	0.65	-2.8
3,126,452	-		CCNA_02969	0.72	-2.3
3,126,503	+		CCNA_02969	0.81	+0.5
3,126,509	+		CCNA_02969	0.82	-0.5
3,126,517	-		CCNA_02969	0.83	-1.9
3,126,544	-		CCNA_02969	0.88	+0.4
3,126,598	+				-0.4
3,126,603	+				-0.4
3,126,611	+				+0.9
3,126,611	-				-0.8
3,126,667	+				-1.2
3,126,668	+				-0.6
3,126,668	+				-0.5
3,126,676	-				+0.5
3,126,676	-				-1.6
3,126,686	-				+0.6
3,126,743	-		CCNA_02970	0.24	-0.4
3,126,828	-		CCNA_02970	0.47	-0.1
3,126,863	-		CCNA_02970	0.57	-0.0
3,126,876	+		CCNA_02970	0.60	+0.1
3,126,913	+		CCNA_02970	0.70	+0.8
3,126,939	-		CCNA_02970	0.77	+0.1
3,126,964	+		CCNA_02970	0.84	+0.7