Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03349

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,527,990	-				+0.4
3,528,018	-				-1.3
3,528,023	-				+0.4
3,528,028	-				+0.2
3,528,053	-				+0.1
3,528,156	+		CCNA_03348	0.14	-0.6
3,528,156	-		CCNA_03348	0.14	-0.2
3,528,162	+		CCNA_03348	0.14	+1.0
3,528,164	-		CCNA_03348	0.15	+1.0
3,528,184	-		CCNA_03348	0.17	+0.5
3,528,258	+		CCNA_03348	0.24	-0.7
3,528,258	+		CCNA_03348	0.24	-0.9
3,528,266	-		CCNA_03348	0.25	+0.9
3,528,268	+		CCNA_03348	0.25	-1.3
3,528,276	-		CCNA_03348	0.26	+0.2
3,528,289	-		CCNA_03348	0.28	-0.9
3,528,289	-		CCNA_03348	0.28	+0.1
3,528,368	-		CCNA_03348	0.36	-1.0
3,528,377	+		CCNA_03348	0.37	+0.4
3,528,377	+		CCNA_03348	0.37	+2.9
3,528,385	-		CCNA_03348	0.38	+0.3
3,528,395	-		CCNA_03348	0.39	-0.8
3,528,396	-		CCNA_03348	0.39	-2.1
3,528,408	+		CCNA_03348	0.40	-0.0
3,528,427	-		CCNA_03348	0.42	-2.3
3,528,442	-		CCNA_03348	0.44	-2.2
3,528,477	+		CCNA_03348	0.47	+0.2
3,528,488	+		CCNA_03348	0.48	-0.0
3,528,496	-		CCNA_03348	0.49	-0.2
3,528,508	-		CCNA_03348	0.50	-1.4
3,528,509	-		CCNA_03348	0.51	-0.2
3,528,535	+		CCNA_03348	0.53	+0.9
3,528,584	+		CCNA_03348	0.58	+0.3
3,528,750	+		CCNA_03348	0.76	-0.2
3,528,757	-		CCNA_03348	0.76	-0.6
3,528,767	-		CCNA_03348	0.78	+0.5
3,528,769	+		CCNA_03348	0.78	-0.5
3,528,881	-		CCNA_03348	0.89	-1.7
3,528,881	-		CCNA_03348	0.89	+1.1
3,528,889	+				-0.0
3,528,897	-				-0.1
3,528,931	-				+1.1
3,528,938	-				-0.1
3,528,946	+				-0.2
3,528,960	-				-0.5
3,528,971	-				+0.2
3,528,975	+				+2.0
3,528,999	-		CCNA_03349	0.11	-1.1
3,528,999	-		CCNA_03349	0.11	+0.5
3,528,999	-		CCNA_03349	0.11	-0.8
3,529,026	-		CCNA_03349	0.25	+0.5
3,529,034	+		CCNA_03349	0.30	-0.5
3,529,035	+		CCNA_03349	0.30	-0.8
3,529,043	-		CCNA_03349	0.34	-0.1
3,529,043	-		CCNA_03349	0.34	-0.2
3,529,043	-		CCNA_03349	0.34	-1.7
3,529,043	-		CCNA_03349	0.34	-0.5
3,529,044	+		CCNA_03349	0.35	+0.8
3,529,058	-		CCNA_03349	0.42	-0.5
3,529,087	-		CCNA_03349	0.58	+1.7
3,529,105	+		CCNA_03349	0.67	+0.1
3,529,113	+		CCNA_03349	0.71	+0.3
3,529,187	-				-0.7
3,529,194	-				-1.0
3,529,234	-				-0.2
3,529,240	+		CCNA_03350	0.13	-0.1
3,529,291	-		CCNA_03350	0.38	-0.5
3,529,317	-		CCNA_03350	0.52	+0.2
3,529,346	-		CCNA_03350	0.66	+0.1
3,529,368	-		CCNA_03350	0.77	-1.1
3,529,370	+		CCNA_03350	0.78	-0.5
3,529,378	+		CCNA_03350	0.82	+1.0
3,529,397	+				+0.2
3,529,405	-				-0.8
3,529,415	+				-2.2
3,529,423	-				-0.2
3,529,423	-				-0.1
3,529,465	-				+0.9
3,529,493	+				-1.8
3,529,493	+				-0.0
3,529,493	+				+0.6
3,529,496	-				-0.1
3,529,496	-				-1.0
3,529,523	+		CCNA_03351	0.11	-0.8
3,529,529	-		CCNA_03351	0.12	-0.1
3,529,531	-		CCNA_03351	0.12	-0.0
3,529,541	-		CCNA_03351	0.13	-0.6
3,529,616	+		CCNA_03351	0.21	-0.3
3,529,634	+		CCNA_03351	0.22	-0.1
3,529,636	+		CCNA_03351	0.23	+0.1
3,529,656	-		CCNA_03351	0.25	+0.3
3,529,661	-		CCNA_03351	0.25	+0.1
3,529,677	-		CCNA_03351	0.27	-0.4
3,529,692	-		CCNA_03351	0.28	-0.1
3,529,705	-		CCNA_03351	0.30	-0.7
3,529,724	-		CCNA_03351	0.32	-0.1
3,529,739	+		CCNA_03351	0.33	-0.2
3,529,740	+		CCNA_03351	0.33	-0.1
3,529,744	+		CCNA_03351	0.34	-0.2
3,529,744	+		CCNA_03351	0.34	+0.3
3,529,747	-		CCNA_03351	0.34	-0.7
3,529,748	-		CCNA_03351	0.34	+0.5
3,529,752	-		CCNA_03351	0.35	+0.6
3,529,777	+		CCNA_03351	0.37	-0.5
3,529,797	+		CCNA_03351	0.39	+0.3
3,529,822	+		CCNA_03351	0.42	-0.4
3,529,826	-		CCNA_03351	0.42	+1.1
3,529,826	-		CCNA_03351	0.42	-0.2
3,529,830	-		CCNA_03351	0.43	-0.2
3,529,830	-		CCNA_03351	0.43	-1.0
3,529,831	-		CCNA_03351	0.43	-0.5
3,529,836	+		CCNA_03351	0.43	-0.4
3,529,836	+		CCNA_03351	0.43	-1.5
3,529,868	-		CCNA_03351	0.47	-0.4
3,529,903	-		CCNA_03351	0.50	-0.8
3,529,929	+		CCNA_03351	0.53	+0.1
3,529,940	+		CCNA_03351	0.54	+0.4
3,529,947	-		CCNA_03351	0.55	+0.1
3,529,950	+		CCNA_03351	0.55	+0.7
3,530,019	+		CCNA_03351	0.62	-0.4
3,530,019	+		CCNA_03351	0.62	+2.8
3,530,021	+		CCNA_03351	0.63	-0.8
3,530,024	-		CCNA_03351	0.63	-0.1
3,530,027	-		CCNA_03351	0.63	+0.3
3,530,074	+		CCNA_03351	0.68	+1.6
3,530,082	-		CCNA_03351	0.69	+0.2
3,530,104	-		CCNA_03351	0.71	-0.9
3,530,124	-		CCNA_03351	0.73	+0.3
3,530,125	+		CCNA_03351	0.73	+0.2
3,530,130	+		CCNA_03351	0.74	-0.0
3,530,156	+		CCNA_03351	0.77	-0.1
3,530,156	+		CCNA_03351	0.77	-1.0
3,530,156	+		CCNA_03351	0.77	+0.0
3,530,156	+		CCNA_03351	0.77	-0.4
3,530,164	-		CCNA_03351	0.77	+0.2
3,530,164	-		CCNA_03351	0.77	+0.5