Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02625

Experiment: PYE with CHIR-090 10 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02624 and CCNA_02625 are separated by 30 nucleotidesCCNA_02625 and CCNA_02626 overlap by 32 nucleotides CCNA_02624: CCNA_02624 - cell division protein FtsA, at 2,773,477 to 2,774,802 _02624 CCNA_02625: CCNA_02625 - cell division protein FtsQ, at 2,774,833 to 2,775,741 _02625 CCNA_02626: CCNA_02626 - D-alanine--D-alanine ligase, at 2,775,710 to 2,776,684 _02626 Position (kb) 2774 2775 2776Strain fitness (log2 ratio) -2 -1 0 1at 2774.854 kb on - strandat 2774.878 kb on + strandat 2775.707 kb on + strandat 2775.707 kb on + strandat 2775.715 kb on - strandat 2776.665 kb on + strandat 2776.707 kb on + strandat 2776.707 kb on + strandat 2776.707 kb on + strandat 2776.732 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE with CHIR-090 10 ug/mL
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2,774,854 - +0.5
2,774,878 + -2.0
2,775,707 + -1.1
2,775,707 + +0.1
2,775,715 - -0.3
2,776,665 + -2.4
2,776,707 + -0.9
2,776,707 + -1.8
2,776,707 + +0.2
2,776,732 - +0.3

Or see this region's nucleotide sequence