Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01890

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
2,030,168	+		CCNA_01889	0.54	-2.0
2,030,168	+		CCNA_01889	0.54	-1.2
2,030,168	+		CCNA_01889	0.54	-2.1
2,030,168	+		CCNA_01889	0.54	+0.7
2,030,176	-		CCNA_01889	0.55	+0.9
2,030,176	-		CCNA_01889	0.55	-0.1
2,030,176	-		CCNA_01889	0.55	+0.1
2,030,181	-		CCNA_01889	0.55	+1.0
2,030,184	+		CCNA_01889	0.55	-0.6
2,030,187	+		CCNA_01889	0.56	+0.2
2,030,217	-		CCNA_01889	0.57	-1.0
2,030,277	+		CCNA_01889	0.61	-0.6
2,030,301	+		CCNA_01889	0.63	-1.2
2,030,301	+		CCNA_01889	0.63	-0.1
2,030,355	+		CCNA_01889	0.66	+0.9
2,030,368	-		CCNA_01889	0.67	+2.3
2,030,394	+		CCNA_01889	0.68	-1.6
2,030,400	+		CCNA_01889	0.69	-0.2
2,030,400	+		CCNA_01889	0.69	-0.4
2,030,401	+		CCNA_01889	0.69	-0.9
2,030,443	-		CCNA_01889	0.71	+0.6
2,030,476	-		CCNA_01889	0.73	+0.4
2,030,556	-		CCNA_01889	0.78	-2.8
2,030,630	+		CCNA_01889	0.83	-1.1
2,030,640	+		CCNA_01889	0.83	-1.3
2,030,681	-		CCNA_01889	0.86	+0.2
2,030,681	-		CCNA_01889	0.86	-0.8
2,030,697	+		CCNA_01889	0.87	-1.4
2,030,697	+		CCNA_01889	0.87	-0.3
2,030,697	+		CCNA_01889	0.87	-1.0
2,030,697	+		CCNA_01889	0.87	-1.0
2,030,697	+		CCNA_01889	0.87	-0.8
2,030,705	-		CCNA_01889	0.87	+0.8
2,030,705	-		CCNA_01889	0.87	-3.2
2,030,733	-		CCNA_01889	0.89	-0.6
2,030,735	+		CCNA_01889	0.89	+0.0
2,030,735	+		CCNA_01889	0.89	-0.7
2,030,743	-		CCNA_01889	0.90	-2.5
2,030,743	-		CCNA_01889	0.90	+0.0
2,030,745	-		CCNA_01889	0.90	+0.3
2,030,753	-				+0.0
2,030,819	+				-1.1
2,030,829	+				-1.8
2,030,880	+				-0.2
2,030,880	+				-1.9
2,030,887	+				-0.4
2,030,887	+				-1.1
2,030,887	+				-2.1
2,030,895	-				-0.8
2,030,897	+				-0.4
2,030,923	+				-0.9
2,030,966	-				+0.2
2,030,966	-				-2.8
2,030,966	-				-1.0
2,030,966	-				+2.2
2,030,970	+				-1.3
2,030,983	+				+0.1
2,030,983	+				-0.2
2,030,983	+				-3.0
2,030,991	-				+1.4
2,031,014	+				-0.3
2,031,022	-				-0.3
2,031,038	+				-2.7
2,031,038	+				-1.1
2,031,046	-				+0.7
2,031,091	-				+1.2
2,031,115	+				-1.4
2,031,261	+				+0.6
2,031,261	+				+0.4
2,031,261	+				+0.4
2,031,261	+				+0.9
2,031,333	+		CCNA_01890	0.12	-2.7
2,031,341	-		CCNA_01890	0.12	-2.5
2,031,361	-		CCNA_01890	0.14	-1.6
2,031,363	+		CCNA_01890	0.14	-0.7
2,031,363	+		CCNA_01890	0.14	+1.0
2,031,364	-		CCNA_01890	0.14	-1.1
2,031,373	+		CCNA_01890	0.14	+0.8
2,031,381	-		CCNA_01890	0.15	+0.6
2,031,381	-		CCNA_01890	0.15	-0.2
2,031,420	-		CCNA_01890	0.18	-1.6
2,031,420	-		CCNA_01890	0.18	-0.3
2,031,478	-		CCNA_01890	0.21	-0.2
2,031,494	+		CCNA_01890	0.23	-0.5
2,031,503	-		CCNA_01890	0.23	+0.9
2,031,511	+		CCNA_01890	0.24	+0.4
2,031,543	-		CCNA_01890	0.26	-2.0
2,031,624	-		CCNA_01890	0.31	-0.6
2,031,649	+		CCNA_01890	0.33	+1.2
2,031,649	+		CCNA_01890	0.33	-0.4
2,031,659	+		CCNA_01890	0.33	-0.6
2,031,659	+		CCNA_01890	0.33	+0.1
2,031,707	-		CCNA_01890	0.37	-0.8
2,031,739	-		CCNA_01890	0.39	+0.3
2,031,763	+		CCNA_01890	0.40	-0.8
2,031,763	+		CCNA_01890	0.40	-1.0
2,031,795	-		CCNA_01890	0.42	-2.3
2,031,808	+		CCNA_01890	0.43	-1.3
2,031,808	+		CCNA_01890	0.43	-3.0
2,031,822	+		CCNA_01890	0.44	-1.4
2,031,946	-		CCNA_01890	0.53	-1.3
2,031,971	+		CCNA_01890	0.54	-1.1
2,031,971	+		CCNA_01890	0.54	+1.6
2,031,978	-		CCNA_01890	0.55	-1.4
2,031,979	-		CCNA_01890	0.55	-1.3
2,031,979	-		CCNA_01890	0.55	+0.1
2,031,979	-		CCNA_01890	0.55	-0.6
2,031,979	-		CCNA_01890	0.55	+0.2
2,031,979	-		CCNA_01890	0.55	-0.0
2,031,979	-		CCNA_01890	0.55	-0.7
2,032,001	+		CCNA_01890	0.56	-1.3
2,032,001	+		CCNA_01890	0.56	-0.2
2,032,006	+		CCNA_01890	0.57	-0.5
2,032,009	-		CCNA_01890	0.57	-0.5
2,032,009	-		CCNA_01890	0.57	-1.4
2,032,035	+		CCNA_01890	0.58	-1.1
2,032,043	-		CCNA_01890	0.59	-1.1
2,032,053	-		CCNA_01890	0.60	-0.1
2,032,067	+		CCNA_01890	0.61	-0.5
2,032,118	+		CCNA_01890	0.64	-2.2
2,032,126	-		CCNA_01890	0.64	-1.1
2,032,181	+		CCNA_01890	0.68	-2.5
2,032,194	+		CCNA_01890	0.69	+0.7
2,032,212	-		CCNA_01890	0.70	+0.7
2,032,235	-		CCNA_01890	0.72	-0.8
2,032,235	-		CCNA_01890	0.72	-0.9
2,032,235	-		CCNA_01890	0.72	-0.9
2,032,256	+		CCNA_01890	0.73	+0.7
2,032,289	+		CCNA_01890	0.75	-0.9
2,032,293	+		CCNA_01890	0.76	+0.7
2,032,349	+		CCNA_01890	0.79	-0.6
2,032,373	-		CCNA_01890	0.81	-0.5
2,032,472	-		CCNA_01890	0.87	-0.1
2,032,490	-		CCNA_01890	0.89	-0.7
2,032,502	+		CCNA_01890	0.89	-0.2
2,032,516	-				-0.4
2,032,516	-				-0.5
2,032,548	-				-2.1
2,032,554	+				-0.8
2,032,576	+				-0.7
2,032,584	-				-2.6
2,032,601	-				-1.2
2,032,601	-				+0.5
2,032,631	-				+1.3
2,032,650	-				-1.4
2,032,662	-				-0.4
2,032,690	+				+0.4
2,032,709	+				-0.3
2,032,709	+				+0.4
2,032,767	+				-2.3
2,032,813	+				-0.2
2,032,821	-				-1.9
2,032,826	+				+0.7
2,032,835	-				+0.2
2,032,849	-				+0.3
2,032,851	+				+0.3
2,032,851	+				+0.2
2,032,859	-		CCNA_01891	0.10	-0.3
2,032,864	+		CCNA_01891	0.11	+0.0
2,032,867	-		CCNA_01891	0.11	-0.3
2,032,869	+		CCNA_01891	0.11	-1.1
2,032,869	+		CCNA_01891	0.11	-0.1
2,032,877	-		CCNA_01891	0.12	-0.1
2,032,893	+		CCNA_01891	0.14	+0.7
2,032,901	-		CCNA_01891	0.15	-0.2
2,032,929	-		CCNA_01891	0.19	+1.3
2,032,935	-		CCNA_01891	0.19	-1.4
2,032,963	+		CCNA_01891	0.23	-0.1
2,032,995	-		CCNA_01891	0.27	-0.4
2,032,996	-		CCNA_01891	0.27	+0.2
2,032,996	-		CCNA_01891	0.27	-0.1
2,033,025	+		CCNA_01891	0.30	-1.3
2,033,033	-		CCNA_01891	0.31	+0.2
2,033,141	-		CCNA_01891	0.44	-2.2
2,033,141	-		CCNA_01891	0.44	-0.6
2,033,206	+		CCNA_01891	0.52	-0.3
2,033,214	-		CCNA_01891	0.53	-0.3
2,033,214	-		CCNA_01891	0.53	-0.7
2,033,214	-		CCNA_01891	0.53	+0.7
2,033,223	+		CCNA_01891	0.54	+0.4
2,033,260	+		CCNA_01891	0.59	-0.8
2,033,268	+		CCNA_01891	0.60	+0.2
2,033,273	+		CCNA_01891	0.60	-1.0
2,033,313	-		CCNA_01891	0.65	-0.1
2,033,352	-		CCNA_01891	0.70	-0.1
2,033,355	-		CCNA_01891	0.70	-0.9
2,033,355	-		CCNA_01891	0.70	-0.6
2,033,355	-		CCNA_01891	0.70	-0.5
2,033,372	+		CCNA_01891	0.72	-0.2
2,033,379	-		CCNA_01891	0.73	-3.0
2,033,380	-		CCNA_01891	0.73	-2.2
2,033,392	-		CCNA_01891	0.75	+0.7
2,033,406	+		CCNA_01891	0.76	-1.3
2,033,445	+		CCNA_01891	0.81	-0.6
2,033,556	-				-2.0
2,033,566	+				+0.1
2,033,574	-				-0.3
2,033,574	-				-0.6