Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01588

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,705,830	-		CCNA_01587	0.36	-0.3
1,705,884	+		CCNA_01587	0.40	-2.2
1,705,891	+		CCNA_01587	0.40	+0.4
1,705,943	+		CCNA_01587	0.44	-0.3
1,705,948	+		CCNA_01587	0.44	+0.1
1,705,948	+		CCNA_01587	0.44	+1.5
1,705,948	+		CCNA_01587	0.44	-0.8
1,705,948	+		CCNA_01587	0.44	+2.3
1,705,948	+		CCNA_01587	0.44	-1.1
1,705,948	+		CCNA_01587	0.44	-0.4
1,705,956	-		CCNA_01587	0.45	-1.9
1,705,956	-		CCNA_01587	0.45	+0.4
1,705,956	-		CCNA_01587	0.45	+0.2
1,705,969	+		CCNA_01587	0.46	+0.6
1,705,977	-		CCNA_01587	0.46	-1.0
1,705,987	-		CCNA_01587	0.47	+0.6
1,706,019	+		CCNA_01587	0.49	-1.2
1,706,059	-		CCNA_01587	0.52	-1.1
1,706,122	+		CCNA_01587	0.56	-0.4
1,706,136	+		CCNA_01587	0.57	-1.5
1,706,180	-		CCNA_01587	0.60	+0.2
1,706,180	-		CCNA_01587	0.60	-2.4
1,706,225	-		CCNA_01587	0.63	-1.0
1,706,227	+		CCNA_01587	0.63	-0.1
1,706,243	+		CCNA_01587	0.65	-1.6
1,706,251	+		CCNA_01587	0.65	-1.8
1,706,251	-		CCNA_01587	0.65	-0.0
1,706,301	+		CCNA_01587	0.69	-0.7
1,706,301	+		CCNA_01587	0.69	-0.4
1,706,309	-		CCNA_01587	0.69	-0.7
1,706,309	-		CCNA_01587	0.69	-0.6
1,706,317	+		CCNA_01587	0.70	+0.3
1,706,335	-		CCNA_01587	0.71	-0.9
1,706,351	+		CCNA_01587	0.72	-0.1
1,706,381	-		CCNA_01587	0.74	-0.9
1,706,396	-		CCNA_01587	0.75	-2.1
1,706,401	+		CCNA_01587	0.76	-0.8
1,706,414	-		CCNA_01587	0.76	-0.0
1,706,433	-		CCNA_01587	0.78	+0.7
1,706,457	+		CCNA_01587	0.79	+0.2
1,706,465	-		CCNA_01587	0.80	-2.0
1,706,467	+		CCNA_01587	0.80	+0.0
1,706,523	-		CCNA_01587	0.84	-0.5
1,706,591	+		CCNA_01587	0.89	-0.6
1,706,592	-		CCNA_01587	0.89	-1.5
1,706,648	+				-0.5
1,706,663	+				-0.1
1,706,694	-				-0.5
1,706,732	+				-0.6
1,706,859	+				+0.8
1,706,859	+				-0.1
1,706,859	+				+2.0
1,706,867	-				+0.5
1,706,867	-				+1.2
1,706,898	-		CCNA_01588	0.11	-0.4
1,706,929	-		CCNA_01588	0.13	+0.8
1,706,939	+		CCNA_01588	0.14	-0.4
1,706,939	+		CCNA_01588	0.14	+0.5
1,706,956	+		CCNA_01588	0.15	+0.2
1,706,971	+		CCNA_01588	0.16	-1.5
1,706,973	+		CCNA_01588	0.16	-1.4
1,706,973	+		CCNA_01588	0.16	-0.9
1,706,973	+		CCNA_01588	0.16	-1.9
1,706,973	+		CCNA_01588	0.16	+0.5
1,706,982	+		CCNA_01588	0.17	-0.5
1,707,026	+		CCNA_01588	0.20	+0.3
1,707,090	+		CCNA_01588	0.25	-1.2
1,707,093	+		CCNA_01588	0.25	+0.1
1,707,177	+		CCNA_01588	0.31	+0.8
1,707,185	-		CCNA_01588	0.32	-1.2
1,707,212	-		CCNA_01588	0.34	+0.2
1,707,239	+		CCNA_01588	0.36	+0.1
1,707,239	-		CCNA_01588	0.36	-0.8
1,707,270	+		CCNA_01588	0.38	-1.0
1,707,278	+		CCNA_01588	0.39	-0.0
1,707,283	+		CCNA_01588	0.39	-0.6
1,707,291	-		CCNA_01588	0.40	-0.0
1,707,335	-		CCNA_01588	0.43	+0.5
1,707,402	-		CCNA_01588	0.48	+3.2
1,707,402	-		CCNA_01588	0.48	-0.4
1,707,421	+		CCNA_01588	0.49	+0.1
1,707,426	+		CCNA_01588	0.50	+0.7
1,707,429	-		CCNA_01588	0.50	+0.0
1,707,433	+		CCNA_01588	0.50	-0.5
1,707,433	+		CCNA_01588	0.50	+0.2
1,707,433	+		CCNA_01588	0.50	-1.8
1,707,441	-		CCNA_01588	0.51	-0.2
1,707,441	-		CCNA_01588	0.51	+0.2
1,707,476	+		CCNA_01588	0.53	-0.2
1,707,496	+		CCNA_01588	0.55	+1.0
1,707,497	+		CCNA_01588	0.55	+0.5
1,707,545	+		CCNA_01588	0.58	+1.0
1,707,545	-		CCNA_01588	0.58	-0.9
1,707,550	-		CCNA_01588	0.59	-0.0
1,707,555	-		CCNA_01588	0.59	-0.8
1,707,563	+		CCNA_01588	0.60	-3.7
1,707,563	-		CCNA_01588	0.60	-0.4
1,707,569	+		CCNA_01588	0.60	-0.4
1,707,569	+		CCNA_01588	0.60	-0.4
1,707,571	-		CCNA_01588	0.60	+0.8
1,707,571	-		CCNA_01588	0.60	+0.8
1,707,577	-		CCNA_01588	0.61	-0.7
1,707,577	-		CCNA_01588	0.61	-0.2
1,707,588	-		CCNA_01588	0.62	+1.3
1,707,588	-		CCNA_01588	0.62	+1.3
1,707,592	+		CCNA_01588	0.62	-0.6
1,707,627	+		CCNA_01588	0.65	+1.4
1,707,627	+		CCNA_01588	0.65	-0.9
1,707,660	-		CCNA_01588	0.67	-0.6
1,707,663	+		CCNA_01588	0.67	+0.5
1,707,663	+		CCNA_01588	0.67	-0.2
1,707,663	+		CCNA_01588	0.67	-0.4
1,707,671	-		CCNA_01588	0.68	+1.0
1,707,671	-		CCNA_01588	0.68	-0.5
1,707,700	+		CCNA_01588	0.70	+1.6
1,707,708	-		CCNA_01588	0.71	-0.9
1,707,841	-		CCNA_01588	0.80	-2.7
1,707,865	-		CCNA_01588	0.82	+0.0
1,708,008	-				+0.7
1,708,032	+				-0.8
1,708,032	+				-0.3
1,708,032	+				+0.1
1,708,032	+				-0.5
1,708,045	+				-0.7
1,708,057	+				-0.3
1,708,088	+				+0.8
1,708,109	+				+0.6
1,708,172	-				-0.1
1,708,189	-				+1.0
1,708,224	+				+0.0
1,708,288	+		CCNA_01589	0.15	+0.2
1,708,296	-		CCNA_01589	0.16	+0.1
1,708,311	+		CCNA_01589	0.18	-0.6
1,708,336	+		CCNA_01589	0.20	-0.9
1,708,352	-		CCNA_01589	0.21	-1.2
1,708,357	-		CCNA_01589	0.22	+0.7
1,708,378	+		CCNA_01589	0.23	-2.0
1,708,402	+		CCNA_01589	0.26	-0.0
1,708,433	+		CCNA_01589	0.28	-2.3
1,708,455	-		CCNA_01589	0.30	+0.8
1,708,455	-		CCNA_01589	0.30	-0.3
1,708,502	+		CCNA_01589	0.34	+0.2
1,708,514	+		CCNA_01589	0.35	-0.4
1,708,514	+		CCNA_01589	0.35	-1.4
1,708,514	+		CCNA_01589	0.35	+0.2
1,708,536	-		CCNA_01589	0.37	-0.3
1,708,580	-		CCNA_01589	0.41	+0.6
1,708,600	+		CCNA_01589	0.43	-1.3
1,708,600	+		CCNA_01589	0.43	+0.7
1,708,600	+		CCNA_01589	0.43	-0.7
1,708,600	+		CCNA_01589	0.43	-0.2
1,708,600	+		CCNA_01589	0.43	+0.5
1,708,600	+		CCNA_01589	0.43	-1.4
1,708,603	-		CCNA_01589	0.43	-0.3
1,708,607	+		CCNA_01589	0.44	-0.4
1,708,608	-		CCNA_01589	0.44	-0.2
1,708,608	-		CCNA_01589	0.44	+0.5
1,708,608	-		CCNA_01589	0.44	-0.6
1,708,618	+		CCNA_01589	0.45	+1.8
1,708,618	+		CCNA_01589	0.45	+0.2
1,708,662	+		CCNA_01589	0.48	+0.5
1,708,715	+		CCNA_01589	0.53	+0.5
1,708,737	+		CCNA_01589	0.55	-2.3
1,708,737	+		CCNA_01589	0.55	-0.5
1,708,745	-		CCNA_01589	0.56	+0.3
1,708,747	+		CCNA_01589	0.56	-0.5
1,708,754	+		CCNA_01589	0.56	-1.5
1,708,774	+		CCNA_01589	0.58	+1.2
1,708,782	-		CCNA_01589	0.59	+0.5
1,708,784	-		CCNA_01589	0.59	-1.2
1,708,815	+		CCNA_01589	0.62	+1.8
1,708,815	+		CCNA_01589	0.62	+0.3
1,708,823	-		CCNA_01589	0.63	-0.5
1,708,823	-		CCNA_01589	0.63	+0.1
1,708,865	-		CCNA_01589	0.66	-0.9
1,708,894	+		CCNA_01589	0.69	-0.9
1,708,897	-		CCNA_01589	0.69	-1.2
1,708,927	+		CCNA_01589	0.72	-0.1
1,708,932	+		CCNA_01589	0.72	-1.0
1,708,963	-		CCNA_01589	0.75	+0.4
1,708,981	-		CCNA_01589	0.76	+1.7
1,708,990	-		CCNA_01589	0.77	+1.6
1,708,996	-		CCNA_01589	0.78	-0.6
1,708,997	-		CCNA_01589	0.78	-1.0
1,709,019	+		CCNA_01589	0.80	-0.1
1,709,027	-		CCNA_01589	0.80	+0.9
1,709,027	-		CCNA_01589	0.80	+1.7
1,709,027	-		CCNA_01589	0.80	-0.3
1,709,027	-		CCNA_01589	0.80	-0.3
1,709,100	+		CCNA_01589	0.87	-1.2
1,709,100	+		CCNA_01589	0.87	-0.2