Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01585

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,701,376	+		CCNA_01584	0.71	-1.1
1,701,462	+		CCNA_01584	0.74	+0.0
1,701,475	+		CCNA_01584	0.75	+0.5
1,701,475	+		CCNA_01584	0.75	-0.3
1,701,475	+		CCNA_01584	0.75	+0.4
1,701,515	-		CCNA_01584	0.77	+0.5
1,701,599	+		CCNA_01584	0.80	-1.1
1,701,599	+		CCNA_01584	0.80	-0.7
1,701,620	+		CCNA_01584	0.81	+0.3
1,701,628	-		CCNA_01584	0.81	-1.6
1,701,649	+		CCNA_01584	0.82	-1.0
1,701,657	-		CCNA_01584	0.83	+0.7
1,701,674	-		CCNA_01584	0.83	+1.0
1,701,697	+		CCNA_01584	0.84	-0.1
1,701,769	+		CCNA_01584	0.87	-0.4
1,701,786	-		CCNA_01584	0.88	+0.8
1,701,804	-		CCNA_01584	0.89	+0.8
1,701,816	-		CCNA_01584	0.89	+1.3
1,701,836	-				+0.3
1,701,860	-				+3.1
1,701,877	-				+1.1
1,701,998	+				+0.9
1,702,038	+				-0.1
1,702,046	-				-0.3
1,702,061	-				-0.1
1,702,066	+				-0.4
1,702,066	+				-1.2
1,702,066	+				+0.0
1,702,066	+				-1.6
1,702,066	+				+1.2
1,702,074	-				+0.4
1,702,074	-				-0.1
1,702,209	-				-1.8
1,702,218	+				+0.5
1,702,234	-				+1.5
1,702,325	+				-2.4
1,702,333	-				-0.0
1,702,403	+				-1.9
1,702,407	+				-1.5
1,702,408	+				+0.8
1,702,415	-				-1.4
1,702,429	+				+0.6
1,702,429	-				-0.4
1,702,454	+				-1.7
1,702,493	+				-0.7
1,702,525	-				+2.2
1,702,525	-				+0.9
1,702,546	+				-1.4
1,702,637	-		CCNA_01585	0.13	-1.5
1,702,638	+		CCNA_01585	0.14	-2.2
1,702,644	+		CCNA_01585	0.14	-0.5
1,702,646	-		CCNA_01585	0.14	-1.2
1,702,646	-		CCNA_01585	0.14	-1.1
1,702,667	-		CCNA_01585	0.15	-0.2
1,702,739	-		CCNA_01585	0.18	+1.0
1,702,739	-		CCNA_01585	0.18	-0.7
1,702,756	+		CCNA_01585	0.19	-0.8
1,702,756	+		CCNA_01585	0.19	-1.9
1,702,772	+		CCNA_01585	0.20	-1.4
1,702,793	-		CCNA_01585	0.21	-3.1
1,702,798	-		CCNA_01585	0.21	+0.2
1,702,809	+		CCNA_01585	0.22	-1.4
1,702,824	-		CCNA_01585	0.22	-2.1
1,702,844	-		CCNA_01585	0.23	-1.1
1,702,857	-		CCNA_01585	0.24	-1.6
1,703,000	+		CCNA_01585	0.31	-1.4
1,703,046	+		CCNA_01585	0.33	-0.9
1,703,046	+		CCNA_01585	0.33	+0.5
1,703,046	+		CCNA_01585	0.33	+0.1
1,703,046	+		CCNA_01585	0.33	-2.7
1,703,046	+		CCNA_01585	0.33	+0.2
1,703,046	+		CCNA_01585	0.33	-1.9
1,703,046	+		CCNA_01585	0.33	-0.7
1,703,046	+		CCNA_01585	0.33	-0.7
1,703,046	+		CCNA_01585	0.33	-1.1
1,703,051	+		CCNA_01585	0.33	+0.4
1,703,054	-		CCNA_01585	0.34	-0.4
1,703,054	-		CCNA_01585	0.34	-0.2
1,703,054	-		CCNA_01585	0.34	-0.5
1,703,054	-		CCNA_01585	0.34	-0.2
1,703,054	-		CCNA_01585	0.34	-0.5
1,703,054	-		CCNA_01585	0.34	-0.5
1,703,054	-		CCNA_01585	0.34	-0.4
1,703,054	-		CCNA_01585	0.34	-0.7
1,703,092	+		CCNA_01585	0.35	-1.5
1,703,126	-		CCNA_01585	0.37	+0.5
1,703,128	+		CCNA_01585	0.37	+0.5
1,703,154	-		CCNA_01585	0.38	-0.4
1,703,225	-		CCNA_01585	0.42	-1.5
1,703,238	-		CCNA_01585	0.42	-0.1
1,703,248	+		CCNA_01585	0.43	-1.1
1,703,256	-		CCNA_01585	0.43	-2.0
1,703,256	-		CCNA_01585	0.43	-0.7
1,703,260	+		CCNA_01585	0.43	-3.1
1,703,325	+		CCNA_01585	0.47	-1.8
1,703,334	-		CCNA_01585	0.47	+0.8
1,703,343	+		CCNA_01585	0.47	-1.0
1,703,406	+		CCNA_01585	0.50	+0.4
1,703,468	+		CCNA_01585	0.53	+0.4
1,703,473	+		CCNA_01585	0.54	+0.8
1,703,473	+		CCNA_01585	0.54	-1.8
1,703,476	-		CCNA_01585	0.54	-2.4
1,703,490	+		CCNA_01585	0.54	-0.2
1,703,501	+		CCNA_01585	0.55	+1.8
1,703,558	+		CCNA_01585	0.58	-0.7
1,703,565	+		CCNA_01585	0.58	-1.6
1,703,565	+		CCNA_01585	0.58	+0.9
1,703,606	-		CCNA_01585	0.60	+0.8
1,703,606	-		CCNA_01585	0.60	-0.2
1,703,653	+		CCNA_01585	0.62	+0.6
1,703,659	-		CCNA_01585	0.63	-0.9
1,703,661	-		CCNA_01585	0.63	+0.2
1,703,692	+		CCNA_01585	0.64	-0.8
1,703,696	-		CCNA_01585	0.64	-0.2
1,703,700	+		CCNA_01585	0.65	-0.4
1,703,707	+		CCNA_01585	0.65	-0.8
1,703,707	+		CCNA_01585	0.65	+1.0
1,703,707	+		CCNA_01585	0.65	-0.6
1,703,707	+		CCNA_01585	0.65	-0.1
1,703,707	+		CCNA_01585	0.65	-0.9
1,703,708	-		CCNA_01585	0.65	-2.4
1,703,713	+		CCNA_01585	0.65	-0.5
1,703,715	-		CCNA_01585	0.65	-2.0
1,703,715	-		CCNA_01585	0.65	-0.2
1,703,715	-		CCNA_01585	0.65	-0.4
1,703,715	-		CCNA_01585	0.65	-0.9
1,703,752	+		CCNA_01585	0.67	-0.4
1,703,758	-		CCNA_01585	0.67	-1.8
1,703,765	-		CCNA_01585	0.68	-0.0
1,703,819	-		CCNA_01585	0.70	-0.7
1,703,843	-		CCNA_01585	0.71	+1.3
1,703,849	-		CCNA_01585	0.72	-0.8
1,703,864	-		CCNA_01585	0.72	+0.5
1,703,864	-		CCNA_01585	0.72	+3.6
1,703,878	+		CCNA_01585	0.73	-1.9
1,703,878	+		CCNA_01585	0.73	+1.0
1,703,886	-		CCNA_01585	0.73	-1.6
1,703,886	-		CCNA_01585	0.73	+1.1
1,703,904	+		CCNA_01585	0.74	-0.8
1,703,913	-		CCNA_01585	0.75	-1.7
1,703,913	-		CCNA_01585	0.75	+0.4
1,703,920	+		CCNA_01585	0.75	-0.4
1,703,943	-		CCNA_01585	0.76	-1.2
1,703,991	-		CCNA_01585	0.79	-0.5
1,704,010	+		CCNA_01585	0.79	+1.1
1,704,028	-		CCNA_01585	0.80	-0.9
1,704,029	+		CCNA_01585	0.80	-0.5
1,704,036	-		CCNA_01585	0.81	+0.3
1,704,144	-		CCNA_01585	0.86	-0.6
1,704,160	+		CCNA_01585	0.87	+0.5
1,704,173	-		CCNA_01585	0.87	-0.2
1,704,217	-		CCNA_01585	0.89	-0.9
1,704,231	+				-0.6
1,704,231	+				+0.2
1,704,251	+				-1.2
1,704,324	+				+0.1
1,704,324	+				+0.1
1,704,337	+				-0.3
1,704,345	-				+0.8
1,704,352	+				+0.2
1,704,352	+				-0.9
1,704,360	-				+0.1
1,704,470	-				+1.3
1,704,471	-				+0.2
1,704,475	-				+0.5
1,704,560	+				-1.0
1,704,561	+				+0.7
1,704,569	-				-0.8
1,704,581	-				+0.7
1,704,676	+		CCNA_01586	0.13	+1.1
1,704,681	-		CCNA_01586	0.13	-2.7
1,704,683	+		CCNA_01586	0.13	+0.1
1,704,683	+		CCNA_01586	0.13	-0.3
1,704,683	+		CCNA_01586	0.13	-1.1
1,704,683	+		CCNA_01586	0.13	-0.3
1,704,845	-		CCNA_01586	0.36	-1.8
1,704,860	+		CCNA_01586	0.38	-2.5
1,704,929	+		CCNA_01586	0.47	+0.5
1,704,995	+		CCNA_01586	0.56	+0.3
1,704,995	+		CCNA_01586	0.56	-0.6
1,705,027	+		CCNA_01586	0.61	-0.1
1,705,035	+		CCNA_01586	0.62	-0.7
1,705,035	-		CCNA_01586	0.62	+0.3
1,705,058	+		CCNA_01586	0.65	-0.0
1,705,118	+		CCNA_01586	0.73	-1.2
1,705,170	-		CCNA_01586	0.81	-2.4
1,705,204	+		CCNA_01586	0.85	-0.0
1,705,212	-		CCNA_01586	0.86	-2.0
1,705,257	-				-0.0
1,705,288	+				+0.2
1,705,333	-				-0.8
1,705,352	+				+0.6
1,705,357	+				-0.5
1,705,375	-				-1.9
1,705,375	-				-2.7
1,705,385	-				-2.2
1,705,407	+				-0.5
1,705,407	+				-0.3