Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01552

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,664,880	-		CCNA_01550	0.61	+0.3
1,664,902	-		CCNA_01550	0.63	-1.5
1,664,946	-		CCNA_01550	0.68	+1.1
1,664,994	-		CCNA_01550	0.73	+0.1
1,665,040	-		CCNA_01550	0.77	-0.3
1,665,073	+		CCNA_01550	0.81	-0.2
1,665,073	+		CCNA_01550	0.81	+3.4
1,665,076	-		CCNA_01550	0.81	-0.9
1,665,081	-		CCNA_01550	0.82	+1.2
1,665,081	-		CCNA_01550	0.82	+1.0
1,665,081	-		CCNA_01550	0.82	+1.0
1,665,132	+		CCNA_01550	0.87	+0.2
1,665,140	-		CCNA_01550	0.88	-0.6
1,665,140	-		CCNA_01550	0.88	+0.5
1,665,212	-				-1.2
1,665,212	-				-0.3
1,665,269	-				-0.4
1,665,316	+				+0.2
1,665,317	+				-0.0
1,665,324	-				-1.0
1,665,324	-				+0.4
1,665,325	-				-0.3
1,665,325	-				-0.8
1,665,330	-				-0.3
1,665,337	-				-0.4
1,665,407	+				-0.4
1,665,408	-				+0.4
1,665,438	+				-0.8
1,665,527	+		CCNA_01551	0.21	+0.8
1,665,527	+		CCNA_01551	0.21	+0.5
1,665,535	-		CCNA_01551	0.25	+0.0
1,665,660	+		CCNA_01551	0.82	-0.4
1,665,757	+				-0.8
1,665,765	-				-3.4
1,665,771	+				-0.3
1,665,798	-				-0.6
1,665,811	+				+1.1
1,665,811	+				+0.0
1,665,827	+				-0.0
1,665,936	+				+0.8
1,665,936	+				+0.3
1,665,936	+				+0.5
1,665,936	+				-0.8
1,665,936	+				+0.4
1,665,944	-				+0.0
1,665,944	-				+0.2
1,666,009	+				+0.5
1,666,016	-				+0.8
1,666,127	-				-0.8
1,666,158	+		CCNA_01552	0.11	-0.6
1,666,272	+		CCNA_01552	0.15	+1.3
1,666,316	-		CCNA_01552	0.17	-1.5
1,666,320	+		CCNA_01552	0.17	-1.8
1,666,381	-		CCNA_01552	0.19	+0.8
1,666,403	-		CCNA_01552	0.20	-0.2
1,667,098	-		CCNA_01552	0.46	-1.5
1,667,134	+		CCNA_01552	0.48	-0.0
1,667,167	-		CCNA_01552	0.49	+0.4
1,667,182	+		CCNA_01552	0.49	+0.8
1,667,312	+		CCNA_01552	0.54	-1.0
1,667,351	-		CCNA_01552	0.56	-0.6
1,667,351	-		CCNA_01552	0.56	-0.2
1,667,355	+		CCNA_01552	0.56	+0.1
1,667,365	+		CCNA_01552	0.56	+0.0
1,667,443	+		CCNA_01552	0.59	-1.0
1,667,443	+		CCNA_01552	0.59	+0.2
1,667,522	+		CCNA_01552	0.62	-1.3
1,667,562	-		CCNA_01552	0.64	-1.5
1,667,756	-		CCNA_01552	0.71	+0.2
1,668,185	+		CCNA_01552	0.87	+0.4
1,668,200	-		CCNA_01552	0.88	+0.4
1,668,366	+				+0.0
1,668,374	-				-0.2
1,668,395	+				-0.2
1,668,395	+				+0.6
1,668,429	-				+1.4
1,668,451	+				+0.7
1,668,462	-				-0.5
1,668,477	+				-0.4
1,668,484	+				+0.5
1,668,513	+				+2.0
1,668,513	+				-0.0
1,668,513	+				-0.0
1,668,513	+				+0.2
1,668,513	+				+0.3
1,668,521	-				-0.9
1,668,521	-				-0.1
1,668,521	-				+0.9
1,668,521	-				+0.5
1,668,526	-				-0.2
1,668,544	+				-0.2
1,668,552	+				+0.9
1,668,578	+				-0.2
1,668,634	+		CCNA_01553	0.18	-1.0
1,668,639	+		CCNA_01553	0.19	+0.9
1,668,639	+		CCNA_01553	0.19	+0.7
1,668,652	-		CCNA_01553	0.21	-2.0
1,668,652	-		CCNA_01553	0.21	+0.6
1,668,756	-		CCNA_01553	0.40	-1.2
1,668,815	+		CCNA_01553	0.50	+1.2
1,668,815	+		CCNA_01553	0.50	-0.0
1,668,815	+		CCNA_01553	0.50	+0.8
1,668,815	+		CCNA_01553	0.50	+0.4
1,668,823	-		CCNA_01553	0.52	-0.7
1,668,823	-		CCNA_01553	0.52	-1.5
1,668,823	-		CCNA_01553	0.52	-0.2
1,668,823	-		CCNA_01553	0.52	+0.8
1,668,823	-		CCNA_01553	0.52	+0.8
1,668,823	-		CCNA_01553	0.52	-0.8
1,668,843	+		CCNA_01553	0.55	+0.6
1,668,848	+		CCNA_01553	0.56	-1.2
1,668,857	-		CCNA_01553	0.58	+0.4
1,668,911	+		CCNA_01553	0.67	-0.5
1,668,941	-		CCNA_01553	0.73	+0.8
1,668,953	-		CCNA_01553	0.75	-0.6
1,669,026	-		CCNA_01553	0.88	-0.8
1,669,046	+				+0.4
1,669,068	-				+1.2
1,669,104	+				+0.4
1,669,112	-				+1.3
1,669,177	-				+0.7
1,669,177	-				+0.3
1,669,177	-				+0.4
1,669,192	+				-1.0
1,669,197	+				+0.3
1,669,200	-				+0.1
1,669,202	+				+0.3
1,669,210	-				-1.0
1,669,216	+				-0.4
1,669,223	+				+0.2
1,669,231	-				-0.0
1,669,270	-		CCNA_01554	0.12	+1.0
1,669,285	+		CCNA_01554	0.13	+0.2
1,669,298	+		CCNA_01554	0.14	-0.7
1,669,353	+		CCNA_01554	0.18	-0.7
1,669,353	-		CCNA_01554	0.18	+0.3
1,669,363	-		CCNA_01554	0.19	-0.8
1,669,400	+		CCNA_01554	0.21	-0.2
1,669,430	+		CCNA_01554	0.23	-2.1
1,669,451	+		CCNA_01554	0.25	+0.4
1,669,451	+		CCNA_01554	0.25	+0.3
1,669,459	-		CCNA_01554	0.25	-1.5
1,669,488	-		CCNA_01554	0.27	-1.6
1,669,518	-		CCNA_01554	0.29	-0.9