Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01520

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,628,154	-				+0.4
1,628,242	-				-0.7
1,628,258	-				+0.1
1,628,258	-				+0.1
1,628,319	+				+0.0
1,628,362	+				-0.1
1,628,389	-		CCNA_01519	0.12	-1.4
1,628,417	+		CCNA_01519	0.16	+0.2
1,628,463	-		CCNA_01519	0.21	-0.2
1,628,466	+		CCNA_01519	0.22	+0.2
1,628,466	+		CCNA_01519	0.22	+0.4
1,628,467	-		CCNA_01519	0.22	+1.0
1,628,469	-		CCNA_01519	0.22	-0.2
1,628,473	+		CCNA_01519	0.23	+0.1
1,628,473	+		CCNA_01519	0.23	+0.1
1,628,473	+		CCNA_01519	0.23	-0.0
1,628,473	+		CCNA_01519	0.23	+0.1
1,628,473	+		CCNA_01519	0.23	+0.7
1,628,473	+		CCNA_01519	0.23	-0.6
1,628,473	+		CCNA_01519	0.23	+0.3
1,628,473	+		CCNA_01519	0.23	+0.2
1,628,474	-		CCNA_01519	0.23	-1.6
1,628,481	-		CCNA_01519	0.23	-0.7
1,628,481	-		CCNA_01519	0.23	-1.8
1,628,481	-		CCNA_01519	0.23	-0.2
1,628,481	-		CCNA_01519	0.23	-1.0
1,628,481	-		CCNA_01519	0.23	-0.2
1,628,481	-		CCNA_01519	0.23	-0.3
1,628,481	-		CCNA_01519	0.23	-0.4
1,628,483	+		CCNA_01519	0.24	-0.9
1,628,483	+		CCNA_01519	0.24	-0.1
1,628,483	+		CCNA_01519	0.24	-0.3
1,628,483	+		CCNA_01519	0.24	+1.3
1,628,483	+		CCNA_01519	0.24	-1.5
1,628,483	+		CCNA_01519	0.24	+0.1
1,628,491	-		CCNA_01519	0.25	+0.5
1,628,538	+		CCNA_01519	0.31	-0.7
1,628,567	+		CCNA_01519	0.34	-0.2
1,628,567	+		CCNA_01519	0.34	+2.8
1,628,567	+		CCNA_01519	0.34	+0.3
1,628,575	-		CCNA_01519	0.35	-1.5
1,628,590	+		CCNA_01519	0.37	+1.1
1,628,598	-		CCNA_01519	0.38	-0.6
1,628,698	-		CCNA_01519	0.50	-0.3
1,628,702	+		CCNA_01519	0.51	+1.1
1,628,702	+		CCNA_01519	0.51	-0.1
1,628,710	-		CCNA_01519	0.52	+0.5
1,628,710	-		CCNA_01519	0.52	+1.6
1,628,726	+		CCNA_01519	0.54	+0.8
1,628,735	-		CCNA_01519	0.55	-0.9
1,628,783	-		CCNA_01519	0.61	+0.3
1,628,805	-		CCNA_01519	0.63	+0.3
1,628,805	-		CCNA_01519	0.63	+0.2
1,628,825	-		CCNA_01519	0.66	-2.4
1,628,825	-		CCNA_01519	0.66	-0.3
1,628,829	+		CCNA_01519	0.66	+0.3
1,628,864	+		CCNA_01519	0.71	+0.3
1,628,897	-		CCNA_01519	0.75	-0.3
1,628,906	+		CCNA_01519	0.76	+0.5
1,628,908	+		CCNA_01519	0.76	+0.2
1,628,908	+		CCNA_01519	0.76	-0.5
1,628,908	+		CCNA_01519	0.76	-0.0
1,628,935	-		CCNA_01519	0.79	-0.4
1,628,956	+		CCNA_01519	0.82	+0.1
1,628,970	+		CCNA_01519	0.84	-0.6
1,628,992	+		CCNA_01519	0.86	-0.7
1,629,015	-		CCNA_01519	0.89	-2.0
1,629,025	-				-0.2
1,629,026	-				+0.2
1,629,051	+				+0.2
1,629,051	+				-2.1
1,629,051	+				+0.3
1,629,051	+				+0.8
1,629,052	+				+0.2
1,629,059	-				-1.1
1,629,059	-				-0.5
1,629,059	-				-1.0
1,629,059	-				+1.4
1,629,060	-				-3.2
1,629,152	-				-0.3
1,629,185	-		CCNA_01520	0.14	-4.3
1,629,215	+		CCNA_01520	0.22	-0.2
1,629,271	+		CCNA_01520	0.37	+0.2
1,629,280	+		CCNA_01520	0.39	-0.2
1,629,280	+		CCNA_01520	0.39	+0.3
1,629,283	+		CCNA_01520	0.40	+0.2
1,629,349	+		CCNA_01520	0.57	-0.1
1,629,410	+		CCNA_01520	0.74	-0.6
1,629,465	-		CCNA_01520	0.88	-0.4
1,629,474	+				+0.4
1,629,549	-				+0.6
1,629,582	+				-0.0
1,629,583	+				+0.3
1,629,583	+				+0.5
1,629,590	-				-0.1
1,629,590	-				+0.8
1,629,590	-				+0.1
1,629,654	+				-0.1
1,629,654	-				+0.7
1,629,671	+				+1.3
1,629,680	+				-0.9
1,629,680	-				+0.2
1,629,690	+				-0.5
1,629,698	-				+0.8
1,629,698	-				-1.2
1,629,698	-				+0.3
1,629,698	-				-1.1
1,629,712	-				+0.5
1,629,719	+				-2.5
1,629,719	+				+1.3
1,629,719	+				-0.6
1,629,809	+		CCNA_01521	0.20	-1.2
1,629,817	-		CCNA_01521	0.21	+0.3
1,629,831	+		CCNA_01521	0.23	-1.2
1,629,866	+		CCNA_01521	0.27	+1.0
1,629,898	-		CCNA_01521	0.31	+0.3
1,629,931	+		CCNA_01521	0.35	-0.8
1,629,931	+		CCNA_01521	0.35	+1.5
1,629,939	-		CCNA_01521	0.36	+0.6
1,629,939	-		CCNA_01521	0.36	-0.1
1,629,950	-		CCNA_01521	0.38	-0.7
1,629,955	-		CCNA_01521	0.38	-0.9
1,629,955	-		CCNA_01521	0.38	-1.4
1,629,998	-		CCNA_01521	0.44	-0.3
1,630,027	-		CCNA_01521	0.47	-0.5
1,630,036	+		CCNA_01521	0.48	-0.3
1,630,068	+		CCNA_01521	0.52	-0.5
1,630,068	+		CCNA_01521	0.52	-0.7
1,630,076	-		CCNA_01521	0.53	-0.9
1,630,102	+		CCNA_01521	0.56	-0.2
1,630,109	+		CCNA_01521	0.57	+0.6
1,630,116	-		CCNA_01521	0.58	-0.1
1,630,118	+		CCNA_01521	0.58	-0.6
1,630,125	-		CCNA_01521	0.59	+1.3
1,630,126	-		CCNA_01521	0.59	-0.2
1,630,126	-		CCNA_01521	0.59	+0.4
1,630,153	+		CCNA_01521	0.62	+1.0
1,630,171	-		CCNA_01521	0.65	+0.0
1,630,171	-		CCNA_01521	0.65	+0.3
1,630,244	-		CCNA_01521	0.74	+1.4
1,630,250	+		CCNA_01521	0.74	-0.4
1,630,250	+		CCNA_01521	0.74	+0.5
1,630,274	+		CCNA_01521	0.77	+0.9
1,630,282	-		CCNA_01521	0.78	+0.2
1,630,282	-		CCNA_01521	0.78	+0.8
1,630,350	+		CCNA_01521	0.87	+0.7
1,630,361	+		CCNA_01521	0.88	+0.6
1,630,397	+				+0.7
1,630,399	+				-0.4
1,630,399	+				-0.8
1,630,407	-				+0.4
1,630,428	-				+0.6
1,630,428	-				-0.1
1,630,438	+				+0.3
1,630,474	+				+0.3
1,630,485	+				-0.2