Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01463

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,569,678	-		CCNA_01462	0.33	-0.1
1,569,690	+		CCNA_01462	0.34	+0.2
1,569,729	+		CCNA_01462	0.37	+0.6
1,569,737	-		CCNA_01462	0.38	+0.4
1,569,744	+		CCNA_01462	0.38	+2.3
1,569,752	-		CCNA_01462	0.39	-0.9
1,569,752	-		CCNA_01462	0.39	-0.9
1,569,762	-		CCNA_01462	0.40	-2.8
1,569,764	-		CCNA_01462	0.40	-0.9
1,569,802	+		CCNA_01462	0.43	-0.5
1,569,865	-		CCNA_01462	0.49	+0.1
1,569,913	+		CCNA_01462	0.53	-0.4
1,569,921	-		CCNA_01462	0.53	-0.0
1,569,947	-		CCNA_01462	0.56	+0.2
1,569,994	+		CCNA_01462	0.60	+0.4
1,569,999	+		CCNA_01462	0.60	-0.9
1,570,002	-		CCNA_01462	0.60	-0.4
1,570,048	+		CCNA_01462	0.64	+0.7
1,570,056	-		CCNA_01462	0.65	-0.6
1,570,079	+		CCNA_01462	0.67	-0.0
1,570,087	-		CCNA_01462	0.67	-1.0
1,570,089	-		CCNA_01462	0.68	+0.8
1,570,098	-		CCNA_01462	0.68	-1.1
1,570,110	-		CCNA_01462	0.69	-0.2
1,570,142	-		CCNA_01462	0.72	+0.2
1,570,203	+		CCNA_01462	0.77	+0.7
1,570,210	-		CCNA_01462	0.78	+0.8
1,570,275	+		CCNA_01462	0.83	+1.2
1,570,284	+		CCNA_01462	0.84	+0.3
1,570,304	+		CCNA_01462	0.86	-0.4
1,570,331	+		CCNA_01462	0.88	+0.0
1,570,344	-		CCNA_01462	0.89	+2.3
1,570,344	-		CCNA_01462	0.89	-0.6
1,570,400	+				+1.1
1,570,425	-				-1.9
1,570,427	-				-0.8
1,570,471	-				-1.0
1,570,550	+				+0.7
1,570,596	+				+0.1
1,570,596	+				+0.1
1,570,596	+				-1.1
1,570,615	+				+1.4
1,570,623	-				+1.1
1,570,663	+				-0.6
1,570,686	-				-0.0
1,570,752	-				+0.6
1,570,758	+				-1.1
1,570,795	-		CCNA_01463	0.12	-0.9
1,570,851	+		CCNA_01463	0.17	-0.8
1,570,982	+		CCNA_01463	0.28	+0.8
1,570,982	+		CCNA_01463	0.28	-0.7
1,570,990	-		CCNA_01463	0.29	+1.0
1,571,024	-		CCNA_01463	0.32	+1.3
1,571,060	-		CCNA_01463	0.35	+0.8
1,571,064	+		CCNA_01463	0.36	-0.6
1,571,120	-		CCNA_01463	0.41	-0.0
1,571,204	+		CCNA_01463	0.48	-0.0
1,571,218	-		CCNA_01463	0.50	+0.6
1,571,279	-		CCNA_01463	0.55	+0.1
1,571,283	+		CCNA_01463	0.55	-1.6
1,571,283	+		CCNA_01463	0.55	-0.7
1,571,286	-		CCNA_01463	0.56	-0.9
1,571,296	+		CCNA_01463	0.57	-0.6
1,571,333	+		CCNA_01463	0.60	-1.5
1,571,423	-		CCNA_01463	0.68	+0.0
1,571,425	+		CCNA_01463	0.68	-1.2
1,571,435	+		CCNA_01463	0.69	-0.2
1,571,435	+		CCNA_01463	0.69	-1.1
1,571,443	-		CCNA_01463	0.70	+0.1
1,571,443	-		CCNA_01463	0.70	+0.8
1,571,460	+		CCNA_01463	0.71	+0.8
1,571,517	-		CCNA_01463	0.77	+0.9
1,571,533	-		CCNA_01463	0.78	+0.3
1,571,534	-		CCNA_01463	0.78	-0.9
1,571,590	+		CCNA_01463	0.83	-0.9
1,571,598	-		CCNA_01463	0.84	-0.0
1,571,686	-				-1.7
1,571,700	-				-0.8
1,571,701	-				-0.1
1,571,707	-				+0.4
1,571,745	+				-1.7
1,571,745	+				-2.1
1,571,753	-				+0.3
1,571,753	-				+2.8
1,571,753	-				+0.2
1,571,844	-				+0.3
1,571,878	-				+0.3
1,571,880	+				-1.4
1,571,896	+		CCNA_03951	0.29	+0.6
1,572,021	-				+0.3
1,572,063	+				-0.6
1,572,063	+				-1.0
1,572,092	+				+0.7
1,572,105	-		CCNA_01464	0.12	+0.4
1,572,105	-		CCNA_01464	0.12	+0.7
1,572,144	+		CCNA_01464	0.25	-0.7
1,572,155	+		CCNA_01464	0.28	+0.0
1,572,162	+		CCNA_01464	0.30	+0.7
1,572,169	+		CCNA_01464	0.32	+1.1
1,572,169	+		CCNA_01464	0.32	-0.3
1,572,193	+		CCNA_01464	0.40	+0.3
1,572,203	+		CCNA_01464	0.43	-2.2
1,572,211	-		CCNA_01464	0.46	+0.8
1,572,214	+		CCNA_01464	0.47	+0.5
1,572,219	+		CCNA_01464	0.48	+0.8
1,572,219	+		CCNA_01464	0.48	+0.2
1,572,222	-		CCNA_01464	0.49	+0.2
1,572,222	-		CCNA_01464	0.49	+0.4
1,572,222	-		CCNA_01464	0.49	+0.5
1,572,222	-		CCNA_01464	0.49	+0.8
1,572,264	-		CCNA_01464	0.62	-1.0
1,572,308	+		CCNA_01464	0.76	+1.5
1,572,326	-		CCNA_01464	0.82	+2.3
1,572,339	+		CCNA_01464	0.86	-1.4
1,572,364	-				+1.8
1,572,387	+				+0.3
1,572,414	-				+0.3
1,572,467	+				-2.4
1,572,506	+				+0.5
1,572,506	+				-0.5
1,572,603	+				+1.7
1,572,630	-				-0.1
1,572,665	-				-1.1
1,572,665	-				-0.0
1,572,698	+				-1.4
1,572,703	+				+1.6
1,572,706	-				-1.2
1,572,711	-				-3.0
1,572,711	-				-1.5
1,572,714	+				+0.4
1,572,731	-				-1.1
1,572,761	+				+0.3