Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01226

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,352,222	+		CCNA_01225	0.15	-0.5
1,352,230	-		CCNA_01225	0.15	+0.8
1,352,241	+		CCNA_01225	0.16	+0.3
1,352,255	+		CCNA_01225	0.18	+0.7
1,352,256	-		CCNA_01225	0.18	-0.9
1,352,271	-		CCNA_01225	0.19	-0.6
1,352,313	-		CCNA_01225	0.23	-1.8
1,352,321	-		CCNA_01225	0.23	+1.1
1,352,325	+		CCNA_01225	0.24	-0.4
1,352,333	-		CCNA_01225	0.24	+0.4
1,352,353	+		CCNA_01225	0.26	-0.9
1,352,353	+		CCNA_01225	0.26	-2.1
1,352,357	-		CCNA_01225	0.27	-0.6
1,352,361	-		CCNA_01225	0.27	-2.7
1,352,361	-		CCNA_01225	0.27	-3.3
1,352,368	+		CCNA_01225	0.28	-0.9
1,352,371	+		CCNA_01225	0.28	-2.1
1,352,381	-		CCNA_01225	0.29	+0.3
1,352,420	-		CCNA_01225	0.32	-1.2
1,352,462	+		CCNA_01225	0.36	-0.1
1,352,480	-		CCNA_01225	0.38	+0.2
1,352,527	-		CCNA_01225	0.42	+0.5
1,352,534	+		CCNA_01225	0.42	-1.3
1,352,534	+		CCNA_01225	0.42	-0.5
1,352,568	-		CCNA_01225	0.45	-0.2
1,352,573	-		CCNA_01225	0.46	-0.7
1,352,575	-		CCNA_01225	0.46	-0.9
1,352,608	+		CCNA_01225	0.49	-0.9
1,352,675	+		CCNA_01225	0.55	-0.5
1,352,700	-		CCNA_01225	0.57	+0.2
1,352,727	-		CCNA_01225	0.59	-1.1
1,352,734	+		CCNA_01225	0.60	-2.3
1,352,734	+		CCNA_01225	0.60	-0.4
1,352,734	+		CCNA_01225	0.60	-1.4
1,352,734	+		CCNA_01225	0.60	-0.6
1,352,734	+		CCNA_01225	0.60	-2.4
1,352,734	+		CCNA_01225	0.60	-0.6
1,352,734	+		CCNA_01225	0.60	+0.3
1,352,742	-		CCNA_01225	0.61	+0.1
1,352,748	+		CCNA_01225	0.61	-2.3
1,352,756	-		CCNA_01225	0.62	+0.1
1,352,757	+		CCNA_01225	0.62	-1.5
1,352,767	+		CCNA_01225	0.63	-1.6
1,352,779	+		CCNA_01225	0.64	-0.2
1,352,787	-		CCNA_01225	0.65	-0.4
1,352,787	-		CCNA_01225	0.65	-0.3
1,352,787	-		CCNA_01225	0.65	-0.3
1,352,817	+		CCNA_01225	0.67	+0.0
1,352,817	+		CCNA_01225	0.67	+0.4
1,352,825	-		CCNA_01225	0.68	+0.0
1,352,825	-		CCNA_01225	0.68	-0.3
1,352,842	+		CCNA_01225	0.70	-1.0
1,352,850	-		CCNA_01225	0.70	-0.3
1,352,877	+		CCNA_01225	0.73	-1.0
1,352,885	-		CCNA_01225	0.73	+0.8
1,352,984	+		CCNA_01225	0.82	-0.7
1,352,989	+		CCNA_01225	0.83	+0.5
1,352,998	-		CCNA_01225	0.83	+0.7
1,353,023	-		CCNA_01225	0.86	-0.0
1,353,039	+		CCNA_01225	0.87	-0.7
1,353,047	-		CCNA_01225	0.88	+0.0
1,353,049	+		CCNA_01225	0.88	-1.7
1,353,049	-		CCNA_01225	0.88	-0.2
1,353,058	+		CCNA_01225	0.89	-1.7
1,353,075	+				+0.5
1,353,084	-				-0.2
1,353,087	+				-0.3
1,353,095	-				+0.7
1,353,095	-				-0.4
1,353,123	-				-1.4
1,353,123	-				-0.6
1,353,133	-				-0.6
1,353,167	-				+0.1
1,353,184	+				-1.1
1,353,184	+				-0.5
1,353,192	-				+1.1
1,353,192	-				+0.1
1,353,230	-				-3.0
1,353,230	-				-1.3
1,353,254	+		CCNA_01226	0.11	-2.7
1,353,262	-		CCNA_01226	0.12	-2.2
1,353,262	-		CCNA_01226	0.12	-1.4
1,353,262	-		CCNA_01226	0.12	-1.4
1,353,262	-		CCNA_01226	0.12	-1.8
1,353,262	-		CCNA_01226	0.12	-2.0
1,353,279	+		CCNA_01226	0.15	-0.9
1,353,294	-		CCNA_01226	0.17	-2.8
1,353,353	-		CCNA_01226	0.26	-1.4
1,353,356	+		CCNA_01226	0.27	-3.0
1,353,369	+		CCNA_01226	0.29	-2.0
1,353,371	+		CCNA_01226	0.29	-0.5
1,353,404	+		CCNA_01226	0.34	-2.0
1,353,412	-		CCNA_01226	0.36	-2.8
1,353,429	+		CCNA_01226	0.38	-0.9
1,353,429	+		CCNA_01226	0.38	-2.5
1,353,429	+		CCNA_01226	0.38	+0.1
1,353,437	-		CCNA_01226	0.40	-1.3
1,353,445	+		CCNA_01226	0.41	-1.7
1,353,445	+		CCNA_01226	0.41	-4.1
1,353,448	-		CCNA_01226	0.41	-3.8
1,353,448	-		CCNA_01226	0.41	-1.3
1,353,468	-		CCNA_01226	0.45	-0.5
1,353,478	-		CCNA_01226	0.46	-0.4
1,353,480	-		CCNA_01226	0.46	+0.1
1,353,480	-		CCNA_01226	0.46	-0.4
1,353,486	-		CCNA_01226	0.47	-0.9
1,353,493	+		CCNA_01226	0.48	-1.2
1,353,503	+		CCNA_01226	0.50	-1.4
1,353,521	+		CCNA_01226	0.53	-0.9
1,353,521	-		CCNA_01226	0.53	-2.0
1,353,561	-		CCNA_01226	0.59	-0.8
1,353,614	-		CCNA_01226	0.68	-2.9
1,353,630	+		CCNA_01226	0.70	-1.2
1,353,631	+		CCNA_01226	0.70	+0.2
1,353,639	-		CCNA_01226	0.72	-0.7
1,353,660	-		CCNA_01226	0.75	-0.6
1,353,769	-				-1.7
1,353,779	-				-1.3
1,353,809	+				-2.3
1,353,809	+				-1.5
1,353,829	+				+1.1
1,353,829	+				+1.3
1,353,837	-				-2.3
1,353,837	-				-0.8
1,353,860	-				-1.6
1,353,882	-				-1.2
1,353,916	-				-0.1
1,353,928	+				-0.2
1,353,939	-				-1.7
1,353,950	+				-0.9
1,353,967	+				-0.7
1,353,975	-				+0.2
1,353,975	-				-1.4
1,353,975	-				-0.1
1,353,988	+				+0.1
1,353,989	+				-0.2
1,353,997	-				-0.1
1,353,997	-				+0.6
1,353,997	-				+0.7
1,353,997	-				+0.7
1,354,011	+				-0.1
1,354,018	+				-0.5
1,354,021	-				-0.2
1,354,021	-				+0.1
1,354,080	-				+0.1
1,354,089	+		CCNA_01227	0.10	-1.6
1,354,089	+		CCNA_01227	0.10	-0.4
1,354,089	+		CCNA_01227	0.10	-0.2
1,354,097	-		CCNA_01227	0.11	+0.3
1,354,097	-		CCNA_01227	0.11	+0.4
1,354,160	-		CCNA_01227	0.17	+0.7
1,354,165	+		CCNA_01227	0.17	+0.8
1,354,184	+		CCNA_01227	0.19	-0.5
1,354,205	-		CCNA_01227	0.21	+1.7
1,354,221	-		CCNA_01227	0.22	-2.7
1,354,253	+		CCNA_01227	0.25	-0.2
1,354,256	-		CCNA_01227	0.26	-1.2
1,354,280	+		CCNA_01227	0.28	+0.7
1,354,296	-		CCNA_01227	0.29	-2.0
1,354,320	+		CCNA_01227	0.32	+0.1
1,354,325	+		CCNA_01227	0.32	-1.2
1,354,325	+		CCNA_01227	0.32	-0.3
1,354,333	-		CCNA_01227	0.33	-0.2
1,354,333	-		CCNA_01227	0.33	-2.2
1,354,333	-		CCNA_01227	0.33	-0.1
1,354,352	-		CCNA_01227	0.35	+0.7
1,354,352	-		CCNA_01227	0.35	-0.6
1,354,386	-		CCNA_01227	0.38	+0.8
1,354,391	-		CCNA_01227	0.38	-0.7
1,354,466	+		CCNA_01227	0.45	+0.2
1,354,466	+		CCNA_01227	0.45	-1.7
1,354,466	+		CCNA_01227	0.45	-0.8
1,354,473	+		CCNA_01227	0.46	+0.3
1,354,473	+		CCNA_01227	0.46	-0.8
1,354,474	-		CCNA_01227	0.46	-0.9
1,354,474	-		CCNA_01227	0.46	-0.5
1,354,498	-		CCNA_01227	0.48	-0.8
1,354,510	-		CCNA_01227	0.50	-0.8
1,354,512	+		CCNA_01227	0.50	+2.1
1,354,526	+		CCNA_01227	0.51	+0.3
1,354,532	+		CCNA_01227	0.52	+0.0
1,354,539	+		CCNA_01227	0.52	-0.1
1,354,540	-		CCNA_01227	0.52	+0.1
1,354,540	-		CCNA_01227	0.52	-0.8
1,354,552	-		CCNA_01227	0.53	-2.1
1,354,563	-		CCNA_01227	0.54	+0.3
1,354,568	-		CCNA_01227	0.55	+1.6
1,354,655	+		CCNA_01227	0.63	-0.5
1,354,667	+		CCNA_01227	0.64	-0.0
1,354,692	+		CCNA_01227	0.67	-0.7
1,354,707	+		CCNA_01227	0.68	-1.7
1,354,707	+		CCNA_01227	0.68	+0.2
1,354,715	-		CCNA_01227	0.69	-0.9
1,354,722	-		CCNA_01227	0.69	-0.4
1,354,771	-		CCNA_01227	0.74	+0.7