Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01218

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,343,605	+				-1.4
1,343,608	+				-1.8
1,343,610	+				-1.7
1,343,635	-				-1.7
1,343,656	-		CCNA_01217	0.11	-3.8
1,343,662	+		CCNA_01217	0.12	-3.2
1,343,695	+		CCNA_01217	0.14	-2.2
1,343,726	-		CCNA_01217	0.17	-0.3
1,343,749	+		CCNA_01217	0.19	-2.3
1,343,754	+		CCNA_01217	0.20	-3.0
1,343,762	-		CCNA_01217	0.20	-4.3
1,343,762	-		CCNA_01217	0.20	-2.7
1,343,779	+		CCNA_01217	0.22	-2.7
1,343,802	+		CCNA_01217	0.24	-1.6
1,343,815	-		CCNA_01217	0.25	-3.4
1,343,894	+		CCNA_01217	0.32	-2.4
1,343,901	+		CCNA_01217	0.33	-3.0
1,343,901	+		CCNA_01217	0.33	-2.3
1,343,901	+		CCNA_01217	0.33	-3.2
1,343,901	+		CCNA_01217	0.33	-2.2
1,343,901	+		CCNA_01217	0.33	-1.9
1,343,901	+		CCNA_01217	0.33	-3.8
1,343,901	+		CCNA_01217	0.33	-2.3
1,343,901	+		CCNA_01217	0.33	-2.8
1,343,901	+		CCNA_01217	0.33	-2.3
1,343,901	+		CCNA_01217	0.33	-1.8
1,343,901	+		CCNA_01217	0.33	-0.1
1,343,901	+		CCNA_01217	0.33	-2.5
1,343,901	+		CCNA_01217	0.33	-1.3
1,343,901	+		CCNA_01217	0.33	-1.1
1,343,901	+		CCNA_01217	0.33	-2.0
1,343,901	+		CCNA_01217	0.33	-2.8
1,343,901	+		CCNA_01217	0.33	-2.5
1,343,901	+		CCNA_01217	0.33	-2.8
1,343,903	+		CCNA_01217	0.33	-0.8
1,343,909	-		CCNA_01217	0.33	-0.2
1,343,909	-		CCNA_01217	0.33	-0.5
1,343,909	-		CCNA_01217	0.33	-1.8
1,343,909	-		CCNA_01217	0.33	-3.8
1,343,909	-		CCNA_01217	0.33	+1.5
1,343,909	-		CCNA_01217	0.33	-1.8
1,343,909	-		CCNA_01217	0.33	-3.4
1,343,909	-		CCNA_01217	0.33	-2.0
1,343,909	-		CCNA_01217	0.33	-3.7
1,343,909	-		CCNA_01217	0.33	-1.8
1,343,909	-		CCNA_01217	0.33	-3.1
1,343,913	-		CCNA_01217	0.34	-2.6
1,343,918	+		CCNA_01217	0.34	-3.5
1,344,032	+		CCNA_01217	0.44	-2.7
1,344,040	-		CCNA_01217	0.45	-1.1
1,344,040	-		CCNA_01217	0.45	-2.8
1,344,042	+		CCNA_01217	0.45	-2.3
1,344,077	+		CCNA_01217	0.48	+0.4
1,344,082	+		CCNA_01217	0.49	-1.4
1,344,083	+		CCNA_01217	0.49	-1.5
1,344,110	-		CCNA_01217	0.51	-0.3
1,344,168	+		CCNA_01217	0.56	-0.8
1,344,168	+		CCNA_01217	0.56	-2.4
1,344,168	+		CCNA_01217	0.56	-2.9
1,344,168	+		CCNA_01217	0.56	-3.2
1,344,168	+		CCNA_01217	0.56	-1.9
1,344,168	+		CCNA_01217	0.56	-2.6
1,344,168	+		CCNA_01217	0.56	-2.3
1,344,186	+		CCNA_01217	0.58	-1.8
1,344,194	-		CCNA_01217	0.59	+1.0
1,344,204	-		CCNA_01217	0.60	-0.0
1,344,231	+		CCNA_01217	0.62	-2.0
1,344,231	+		CCNA_01217	0.62	-2.5
1,344,232	+		CCNA_01217	0.62	-1.5
1,344,244	-		CCNA_01217	0.63	-3.5
1,344,306	-		CCNA_01217	0.69	-1.2
1,344,317	-		CCNA_01217	0.70	-1.0
1,344,347	-		CCNA_01217	0.72	-0.9
1,344,352	-		CCNA_01217	0.73	-2.6
1,344,369	-		CCNA_01217	0.74	-2.2
1,344,433	-		CCNA_01217	0.80	-0.5
1,344,453	+		CCNA_01217	0.82	-2.8
1,344,453	-		CCNA_01217	0.82	+0.7
1,344,501	-		CCNA_01217	0.86	+0.4
1,344,517	+		CCNA_01217	0.87	-3.0
1,344,542	+		CCNA_01217	0.90	-3.2
1,344,566	+				-3.2
1,344,573	+				-1.7
1,344,636	+				-2.1
1,344,636	+				-2.4
1,344,664	+				+0.3
1,344,672	-				-0.8
1,344,732	-		CCNA_01218	0.16	-3.3
1,344,772	-		CCNA_01218	0.20	-3.5
1,344,800	+		CCNA_01218	0.22	-2.7
1,344,800	+		CCNA_01218	0.22	-1.9
1,344,808	-		CCNA_01218	0.23	-0.9
1,344,808	-		CCNA_01218	0.23	-3.1
1,344,808	-		CCNA_01218	0.23	-2.3
1,344,808	-		CCNA_01218	0.23	-2.3
1,344,808	-		CCNA_01218	0.23	-1.1
1,344,808	-		CCNA_01218	0.23	-2.1
1,344,915	+		CCNA_01218	0.34	-4.1
1,344,924	-		CCNA_01218	0.35	-2.4
1,345,048	+		CCNA_01218	0.47	-2.9
1,345,101	-		CCNA_01218	0.53	-1.8
1,345,109	-		CCNA_01218	0.53	-4.3
1,345,127	+		CCNA_01218	0.55	-4.0
1,345,148	-		CCNA_01218	0.57	-1.8
1,345,154	-		CCNA_01218	0.58	-1.6
1,345,172	+		CCNA_01218	0.60	-3.2
1,345,184	+		CCNA_01218	0.61	-3.0
1,345,186	+		CCNA_01218	0.61	-0.3
1,345,194	-		CCNA_01218	0.62	-2.1
1,345,243	-		CCNA_01218	0.67	-3.0
1,345,245	+		CCNA_01218	0.67	-5.0
1,345,321	+		CCNA_01218	0.75	-0.8
1,345,381	+		CCNA_01218	0.81	-2.6
1,345,381	+		CCNA_01218	0.81	-4.1
1,345,381	+		CCNA_01218	0.81	-2.8
1,345,381	+		CCNA_01218	0.81	-2.9
1,345,389	-		CCNA_01218	0.82	-3.9
1,345,423	-		CCNA_01218	0.85	-2.3
1,345,507	+				-1.0
1,345,515	-				-1.5
1,345,547	+				-2.1
1,345,550	-				-3.1
1,345,555	-				-0.6
1,345,631	+				-1.1
1,345,656	+		CCNA_01219	0.10	-2.7
1,345,680	+		CCNA_01219	0.13	-2.6
1,345,696	-		CCNA_01219	0.15	-2.2
1,345,744	-		CCNA_01219	0.20	-2.8
1,345,763	+		CCNA_01219	0.22	-2.5
1,345,798	-		CCNA_01219	0.26	-3.1
1,345,869	+		CCNA_01219	0.34	-1.6
1,345,877	-		CCNA_01219	0.35	-1.7
1,345,917	-		CCNA_01219	0.40	-3.3
1,345,949	-		CCNA_01219	0.43	-0.7
1,345,949	-		CCNA_01219	0.43	-1.7
1,345,949	-		CCNA_01219	0.43	-1.3
1,345,980	+		CCNA_01219	0.47	-3.6
1,346,030	-		CCNA_01219	0.52	-0.4
1,346,073	-		CCNA_01219	0.57	-1.1
1,346,122	+		CCNA_01219	0.63	+0.5
1,346,182	+		CCNA_01219	0.70	-0.6
1,346,182	+		CCNA_01219	0.70	-2.3
1,346,182	+		CCNA_01219	0.70	-2.7
1,346,208	+		CCNA_01219	0.73	-0.9
1,346,213	+		CCNA_01219	0.73	-2.1
1,346,223	+		CCNA_01219	0.74	-1.9
1,346,231	-		CCNA_01219	0.75	-3.4
1,346,231	-		CCNA_01219	0.75	-0.9
1,346,231	-		CCNA_01219	0.75	-2.5
1,346,237	-		CCNA_01219	0.76	+0.4
1,346,256	-		CCNA_01219	0.78	-0.7
1,346,260	+		CCNA_01219	0.79	-3.1
1,346,273	-		CCNA_01219	0.80	+0.3
1,346,289	-		CCNA_01219	0.82	+0.1
1,346,412	+				+0.3
1,346,418	+				+0.9
1,346,420	-				-4.2
1,346,426	-				-1.2
1,346,530	+				-0.3
1,346,538	-				+0.1
1,346,558	-				-2.9