Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01111

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,216,035	+		CCNA_01110	0.28	+0.9
1,216,060	-		CCNA_01110	0.31	-2.0
1,216,112	+		CCNA_01110	0.36	+0.5
1,216,120	-		CCNA_01110	0.37	-0.3
1,216,194	-		CCNA_01110	0.45	+0.2
1,216,293	+		CCNA_01110	0.56	-0.5
1,216,301	-		CCNA_01110	0.57	+0.8
1,216,303	+		CCNA_01110	0.57	+0.4
1,216,328	+		CCNA_01110	0.60	+1.0
1,216,346	-		CCNA_01110	0.62	-2.4
1,216,346	-		CCNA_01110	0.62	-0.1
1,216,356	+		CCNA_01110	0.63	-0.4
1,216,386	+		CCNA_01110	0.66	+0.4
1,216,401	+		CCNA_01110	0.68	+0.5
1,216,401	+		CCNA_01110	0.68	+0.6
1,216,409	-		CCNA_01110	0.69	-0.1
1,216,409	-		CCNA_01110	0.69	-0.5
1,216,409	-		CCNA_01110	0.69	-0.2
1,216,454	+		CCNA_01110	0.73	-0.3
1,216,473	+		CCNA_01110	0.75	+0.1
1,216,493	-		CCNA_01110	0.78	+0.6
1,216,498	-		CCNA_01110	0.78	-0.9
1,216,520	+		CCNA_01110	0.80	+0.2
1,216,520	+		CCNA_01110	0.80	+0.4
1,216,528	-		CCNA_01110	0.81	+0.4
1,216,528	-		CCNA_01110	0.81	-0.5
1,216,528	-		CCNA_01110	0.81	-0.4
1,216,528	-		CCNA_01110	0.81	+0.7
1,216,528	-		CCNA_01110	0.81	-1.8
1,216,599	+		CCNA_01110	0.89	+0.1
1,216,609	-				+0.7
1,216,681	+				+1.0
1,216,681	+				+0.6
1,216,688	-				+0.7
1,216,688	-				+0.2
1,216,689	+				-0.2
1,216,689	+				-0.3
1,216,689	+				-0.1
1,216,690	+				+0.9
1,216,697	-				-0.9
1,216,697	-				-0.1
1,216,697	-				-0.3
1,216,697	-				-0.9
1,216,697	-				+0.1
1,216,705	+				+0.2
1,216,778	-				-2.1
1,216,823	-				-0.5
1,216,840	+				-0.7
1,216,848	-				-0.5
1,217,009	+				+0.8
1,217,009	+				-0.9
1,217,017	-				+0.1
1,217,017	-				+1.0
1,217,017	-				-0.8
1,217,051	+				-0.6
1,217,059	-				-1.3
1,217,059	-				+0.3
1,217,059	-				-1.4
1,217,073	-		CCNA_01111	0.12	+0.5
1,217,118	+		CCNA_01111	0.24	+0.7
1,217,156	+		CCNA_01111	0.35	-0.1
1,217,164	-		CCNA_01111	0.37	-1.1
1,217,164	-		CCNA_01111	0.37	+0.4
1,217,164	-		CCNA_01111	0.37	-0.3
1,217,164	-		CCNA_01111	0.37	-0.3
1,217,168	+		CCNA_01111	0.38	+0.3
1,217,215	+		CCNA_01111	0.51	+0.2
1,217,220	+		CCNA_01111	0.52	+0.5
1,217,223	-		CCNA_01111	0.53	+0.0
1,217,225	+		CCNA_01111	0.53	+0.1
1,217,228	-		CCNA_01111	0.54	+0.1
1,217,238	-		CCNA_01111	0.57	-0.1
1,217,273	-		CCNA_01111	0.66	+0.2
1,217,346	+		CCNA_01111	0.86	+0.7
1,217,388	-				+0.9
1,217,437	-				-0.6
1,217,437	-				-0.3
1,217,473	+		CCNA_01112	0.10	+1.5
1,217,559	+		CCNA_01112	0.22	+0.5
1,217,559	+		CCNA_01112	0.22	+0.2
1,217,582	+		CCNA_01112	0.25	+0.3
1,217,590	-		CCNA_01112	0.26	+0.5
1,217,590	-		CCNA_01112	0.26	+0.1
1,217,590	-		CCNA_01112	0.26	+0.2
1,217,590	-		CCNA_01112	0.26	-0.2
1,217,609	-		CCNA_01112	0.29	+0.3
1,217,609	-		CCNA_01112	0.29	-0.1
1,217,772	-		CCNA_01112	0.51	+0.3
1,217,785	+		CCNA_01112	0.53	+0.7
1,217,785	+		CCNA_01112	0.53	-1.1
1,217,785	+		CCNA_01112	0.53	-0.2
1,217,785	+		CCNA_01112	0.53	-0.7
1,217,793	-		CCNA_01112	0.54	+0.4
1,217,798	-		CCNA_01112	0.55	-1.3
1,217,836	+		CCNA_01112	0.60	+0.7
1,217,853	+		CCNA_01112	0.62	+0.1
1,217,868	-		CCNA_01112	0.64	-0.0
1,217,910	-		CCNA_01112	0.70	+0.4
1,217,920	-		CCNA_01112	0.71	-1.4
1,217,920	-		CCNA_01112	0.71	+0.5
1,217,932	+		CCNA_01112	0.73	-0.3
1,217,979	+		CCNA_01112	0.79	-0.5
1,217,987	-		CCNA_01112	0.80	+0.2
1,218,100	+				+1.2
1,218,121	+				-1.7
1,218,133	-				+0.3
1,218,159	-				+1.1
1,218,194	-				+0.1
1,218,196	+				+0.0
1,218,196	+				+0.6
1,218,196	+				-0.9
1,218,199	-				+0.3
1,218,204	-				+0.9
1,218,204	-				-0.0
1,218,242	+		CCNA_01113	0.11	-0.5
1,218,252	+		CCNA_01113	0.12	-0.5
1,218,252	+		CCNA_01113	0.12	-0.3
1,218,252	+		CCNA_01113	0.12	+0.0
1,218,252	+		CCNA_01113	0.12	-1.2
1,218,252	+		CCNA_01113	0.12	-1.0
1,218,252	+		CCNA_01113	0.12	-1.6
1,218,260	-		CCNA_01113	0.13	-0.3
1,218,274	-		CCNA_01113	0.14	-0.1
1,218,279	+		CCNA_01113	0.15	+1.1
1,218,279	+		CCNA_01113	0.15	+0.1
1,218,284	+		CCNA_01113	0.15	+0.5
1,218,292	-		CCNA_01113	0.16	-0.0
1,218,293	+		CCNA_01113	0.16	-1.8
1,218,299	+		CCNA_01113	0.17	-1.4
1,218,301	-		CCNA_01113	0.17	+0.6
1,218,350	-		CCNA_01113	0.22	+1.0
1,218,353	+		CCNA_01113	0.23	+0.7
1,218,353	+		CCNA_01113	0.23	+0.6
1,218,353	+		CCNA_01113	0.23	-1.1
1,218,353	+		CCNA_01113	0.23	+0.0
1,218,353	+		CCNA_01113	0.23	-0.6
1,218,353	+		CCNA_01113	0.23	-1.3
1,218,361	-		CCNA_01113	0.23	+0.7
1,218,361	-		CCNA_01113	0.23	+0.5
1,218,361	-		CCNA_01113	0.23	+1.5
1,218,361	-		CCNA_01113	0.23	-0.7
1,218,361	-		CCNA_01113	0.23	+0.0
1,218,361	-		CCNA_01113	0.23	-0.8
1,218,361	-		CCNA_01113	0.23	+0.1
1,218,363	+		CCNA_01113	0.24	-1.2
1,218,363	+		CCNA_01113	0.24	-0.0
1,218,363	+		CCNA_01113	0.24	+0.2
1,218,363	+		CCNA_01113	0.24	+0.8
1,218,371	-		CCNA_01113	0.24	+0.2
1,218,371	-		CCNA_01113	0.24	-0.8
1,218,371	-		CCNA_01113	0.24	-1.9