Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19230 and CA264_19235 are separated by 141 nucleotides CA264_19235 and CA264_19240 are separated by 52 nucleotides CA264_19240 and CA264_19245 are separated by 80 nucleotides CA264_19245 and CA264_19250 are separated by 85 nucleotides
CA264_19230: CA264_19230 - nicotinate-nicotinamide nucleotide adenylyltransferase, at 4,465,896 to 4,466,468
_19230
CA264_19235: CA264_19235 - ribosome-recycling factor, at 4,466,610 to 4,467,173
_19235
CA264_19240: CA264_19240 - UMP kinase, at 4,467,226 to 4,468,002
_19240
CA264_19245: CA264_19245 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 4,468,083 to 4,468,583
_19245
CA264_19250: CA264_19250 - alanyl aminopeptidase, at 4,468,669 to 4,471,161
_19250
Position (kb)
4467
4468
4469 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4466.493 kb on + strand at 4466.515 kb on + strand at 4466.516 kb on - strand at 4466.516 kb on - strand at 4466.521 kb on - strand at 4466.579 kb on + strand at 4466.579 kb on + strand at 4466.603 kb on + strand at 4466.611 kb on + strand at 4467.185 kb on + strand at 4467.186 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.081 kb on - strand at 4468.173 kb on - strand, within CA264_19245 at 4468.173 kb on - strand, within CA264_19245 at 4468.260 kb on + strand, within CA264_19245 at 4468.260 kb on + strand, within CA264_19245 at 4468.261 kb on - strand, within CA264_19245 at 4468.261 kb on - strand, within CA264_19245 at 4468.261 kb on - strand, within CA264_19245 at 4468.261 kb on - strand, within CA264_19245 at 4468.263 kb on - strand, within CA264_19245 at 4468.362 kb on - strand, within CA264_19245 at 4468.362 kb on - strand, within CA264_19245 at 4468.371 kb on + strand, within CA264_19245 at 4468.371 kb on + strand, within CA264_19245 at 4468.412 kb on - strand, within CA264_19245 at 4468.426 kb on - strand, within CA264_19245 at 4468.466 kb on - strand, within CA264_19245 at 4468.470 kb on - strand, within CA264_19245 at 4468.523 kb on + strand, within CA264_19245 at 4468.523 kb on + strand, within CA264_19245 at 4468.607 kb on + strand at 4468.608 kb on - strand at 4468.608 kb on - strand at 4468.614 kb on - strand at 4468.629 kb on + strand at 4468.678 kb on - strand at 4468.691 kb on + strand at 4468.692 kb on - strand at 4468.695 kb on - strand at 4468.695 kb on - strand at 4468.695 kb on - strand at 4468.695 kb on - strand at 4468.752 kb on - strand at 4468.752 kb on - strand at 4468.915 kb on + strand at 4468.938 kb on + strand, within CA264_19250 at 4468.952 kb on - strand, within CA264_19250
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 4,466,493 + +1.1 4,466,515 + +2.4 4,466,516 - +0.6 4,466,516 - -0.3 4,466,521 - -1.3 4,466,579 + -1.6 4,466,579 + -1.9 4,466,603 + -0.3 4,466,611 + -0.2 4,467,185 + +1.8 4,467,186 - -0.3 4,468,081 - +0.7 4,468,081 - +0.1 4,468,081 - +1.3 4,468,081 - -1.3 4,468,081 - +4.0 4,468,081 - +0.9 4,468,173 - CA264_19245 0.18 -0.7 4,468,173 - CA264_19245 0.18 +0.8 4,468,260 + CA264_19245 0.35 -1.5 4,468,260 + CA264_19245 0.35 -2.8 4,468,261 - CA264_19245 0.36 +1.6 4,468,261 - CA264_19245 0.36 -0.6 4,468,261 - CA264_19245 0.36 -0.7 4,468,261 - CA264_19245 0.36 -0.3 4,468,263 - CA264_19245 0.36 +0.0 4,468,362 - CA264_19245 0.56 +0.1 4,468,362 - CA264_19245 0.56 -0.9 4,468,371 + CA264_19245 0.57 -0.3 4,468,371 + CA264_19245 0.57 -0.8 4,468,412 - CA264_19245 0.66 -0.1 4,468,426 - CA264_19245 0.68 +0.8 4,468,466 - CA264_19245 0.76 +2.6 4,468,470 - CA264_19245 0.77 -0.7 4,468,523 + CA264_19245 0.88 -1.3 4,468,523 + CA264_19245 0.88 -1.3 4,468,607 + +0.7 4,468,608 - +0.3 4,468,608 - +2.7 4,468,614 - -0.3 4,468,629 + +2.9 4,468,678 - -1.1 4,468,691 + +1.4 4,468,692 - -0.8 4,468,695 - -0.1 4,468,695 - +0.3 4,468,695 - -2.3 4,468,695 - -0.8 4,468,752 - +0.2 4,468,752 - +0.8 4,468,915 + +0.0 4,468,938 + CA264_19250 0.11 +0.4 4,468,952 - CA264_19250 0.11 -0.8
Or see this region's nucleotide sequence