Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19060 and CA264_19065 are separated by 6 nucleotides CA264_19065 and CA264_19070 are separated by 160 nucleotides CA264_19070 and CA264_19075 are separated by 4 nucleotides CA264_19075 and CA264_19080 overlap by 65 nucleotides
CA264_19060: CA264_19060 - hypothetical protein, at 4,429,689 to 4,431,086
_19060
CA264_19065: CA264_19065 - phosphosulfolactate synthase, at 4,431,093 to 4,431,866
_19065
CA264_19070: CA264_19070 - DUF368 domain-containing protein, at 4,432,027 to 4,432,926
_19070
CA264_19075: CA264_19075 - shikimate dehydrogenase, at 4,432,931 to 4,433,671
_19075
CA264_19080: CA264_19080 - hypothetical protein, at 4,433,607 to 4,434,173
_19080
Position (kb)
4432
4433 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4431.896 kb on - strand at 4431.896 kb on - strand at 4431.963 kb on - strand at 4432.923 kb on - strand at 4432.930 kb on + strand at 4432.930 kb on + strand at 4432.931 kb on - strand at 4433.700 kb on + strand, within CA264_19080 at 4433.729 kb on + strand, within CA264_19080 at 4433.729 kb on + strand, within CA264_19080 at 4433.730 kb on - strand, within CA264_19080 at 4433.737 kb on + strand, within CA264_19080 at 4433.752 kb on - strand, within CA264_19080 at 4433.752 kb on - strand, within CA264_19080 at 4433.752 kb on - strand, within CA264_19080 at 4433.788 kb on + strand, within CA264_19080 at 4433.788 kb on + strand, within CA264_19080 at 4433.789 kb on - strand, within CA264_19080 at 4433.795 kb on + strand, within CA264_19080 at 4433.832 kb on + strand, within CA264_19080 at 4433.833 kb on - strand, within CA264_19080 at 4433.841 kb on + strand, within CA264_19080
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 4,431,896 - -0.4 4,431,896 - -0.6 4,431,963 - -0.5 4,432,923 - -0.9 4,432,930 + -2.8 4,432,930 + -0.9 4,432,931 - +0.1 4,433,700 + CA264_19080 0.16 +2.1 4,433,729 + CA264_19080 0.22 +1.2 4,433,729 + CA264_19080 0.22 +0.2 4,433,730 - CA264_19080 0.22 -1.8 4,433,737 + CA264_19080 0.23 -1.4 4,433,752 - CA264_19080 0.26 -0.0 4,433,752 - CA264_19080 0.26 +0.1 4,433,752 - CA264_19080 0.26 +0.5 4,433,788 + CA264_19080 0.32 -1.1 4,433,788 + CA264_19080 0.32 -0.5 4,433,789 - CA264_19080 0.32 +1.6 4,433,795 + CA264_19080 0.33 -0.1 4,433,832 + CA264_19080 0.40 -0.1 4,433,833 - CA264_19080 0.40 -0.2 4,433,841 + CA264_19080 0.41 +0.4
Or see this region's nucleotide sequence