Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18030 and CA264_18035 are separated by 109 nucleotides CA264_18035 and CA264_18040 are separated by 65 nucleotides
CA264_18030: CA264_18030 - cation transporter, at 4,192,439 to 4,193,710
_18030
CA264_18035: CA264_18035 - alpha-ketoglutarate-dependent dioxygenase AlkB, at 4,193,820 to 4,194,410
_18035
CA264_18040: CA264_18040 - kynurenine 3-monooxygenase, at 4,194,476 to 4,195,843
_18040
Position (kb)
4193
4194
4195 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4192.828 kb on - strand, within CA264_18030 at 4193.040 kb on - strand, within CA264_18030 at 4193.093 kb on + strand, within CA264_18030 at 4193.267 kb on + strand, within CA264_18030 at 4193.268 kb on - strand, within CA264_18030 at 4193.302 kb on - strand, within CA264_18030 at 4193.394 kb on + strand, within CA264_18030 at 4193.395 kb on - strand, within CA264_18030 at 4193.522 kb on + strand, within CA264_18030 at 4193.542 kb on + strand, within CA264_18030 at 4193.584 kb on - strand at 4193.613 kb on + strand at 4193.613 kb on + strand at 4193.808 kb on + strand at 4193.809 kb on - strand at 4193.834 kb on - strand at 4193.907 kb on + strand, within CA264_18035 at 4193.908 kb on - strand, within CA264_18035 at 4193.933 kb on - strand, within CA264_18035 at 4193.953 kb on + strand, within CA264_18035 at 4193.954 kb on - strand, within CA264_18035 at 4194.021 kb on + strand, within CA264_18035 at 4194.021 kb on + strand, within CA264_18035 at 4194.022 kb on - strand, within CA264_18035 at 4194.108 kb on + strand, within CA264_18035 at 4194.109 kb on - strand, within CA264_18035 at 4194.200 kb on + strand, within CA264_18035 at 4194.302 kb on - strand, within CA264_18035 at 4194.350 kb on + strand, within CA264_18035 at 4194.351 kb on - strand, within CA264_18035 at 4194.445 kb on + strand at 4194.476 kb on - strand at 4194.540 kb on - strand at 4194.675 kb on + strand, within CA264_18040 at 4194.675 kb on + strand, within CA264_18040 at 4194.710 kb on + strand, within CA264_18040 at 4194.711 kb on - strand, within CA264_18040 at 4194.750 kb on - strand, within CA264_18040 at 4194.781 kb on - strand, within CA264_18040 at 4194.782 kb on + strand, within CA264_18040 at 4194.782 kb on + strand, within CA264_18040 at 4194.782 kb on + strand, within CA264_18040 at 4194.783 kb on - strand, within CA264_18040 at 4194.783 kb on - strand, within CA264_18040 at 4194.848 kb on - strand, within CA264_18040 at 4194.915 kb on + strand, within CA264_18040 at 4194.916 kb on - strand, within CA264_18040 at 4194.916 kb on - strand, within CA264_18040 at 4195.019 kb on + strand, within CA264_18040 at 4195.019 kb on + strand, within CA264_18040 at 4195.168 kb on + strand, within CA264_18040 at 4195.174 kb on + strand, within CA264_18040 at 4195.302 kb on - strand, within CA264_18040
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 4,192,828 - CA264_18030 0.31 -1.5 4,193,040 - CA264_18030 0.47 -1.3 4,193,093 + CA264_18030 0.51 -0.1 4,193,267 + CA264_18030 0.65 -0.1 4,193,268 - CA264_18030 0.65 +0.3 4,193,302 - CA264_18030 0.68 -0.1 4,193,394 + CA264_18030 0.75 -0.6 4,193,395 - CA264_18030 0.75 -0.8 4,193,522 + CA264_18030 0.85 +0.5 4,193,542 + CA264_18030 0.87 +0.8 4,193,584 - +0.2 4,193,613 + +1.2 4,193,613 + -0.5 4,193,808 + -0.7 4,193,809 - +0.3 4,193,834 - -0.5 4,193,907 + CA264_18035 0.15 -0.8 4,193,908 - CA264_18035 0.15 -0.5 4,193,933 - CA264_18035 0.19 -1.3 4,193,953 + CA264_18035 0.23 -0.9 4,193,954 - CA264_18035 0.23 -0.1 4,194,021 + CA264_18035 0.34 -0.1 4,194,021 + CA264_18035 0.34 -1.3 4,194,022 - CA264_18035 0.34 +0.6 4,194,108 + CA264_18035 0.49 -0.2 4,194,109 - CA264_18035 0.49 -0.4 4,194,200 + CA264_18035 0.64 -0.1 4,194,302 - CA264_18035 0.82 -0.8 4,194,350 + CA264_18035 0.90 -0.8 4,194,351 - CA264_18035 0.90 -0.4 4,194,445 + -2.0 4,194,476 - -1.6 4,194,540 - -0.8 4,194,675 + CA264_18040 0.15 -2.2 4,194,675 + CA264_18040 0.15 -1.3 4,194,710 + CA264_18040 0.17 -2.0 4,194,711 - CA264_18040 0.17 +1.0 4,194,750 - CA264_18040 0.20 -1.5 4,194,781 - CA264_18040 0.22 +1.2 4,194,782 + CA264_18040 0.22 -1.7 4,194,782 + CA264_18040 0.22 -0.5 4,194,782 + CA264_18040 0.22 +0.1 4,194,783 - CA264_18040 0.22 +0.6 4,194,783 - CA264_18040 0.22 -1.6 4,194,848 - CA264_18040 0.27 -1.0 4,194,915 + CA264_18040 0.32 -0.0 4,194,916 - CA264_18040 0.32 +0.4 4,194,916 - CA264_18040 0.32 +0.5 4,195,019 + CA264_18040 0.40 -0.1 4,195,019 + CA264_18040 0.40 +0.1 4,195,168 + CA264_18040 0.51 -1.9 4,195,174 + CA264_18040 0.51 +1.8 4,195,302 - CA264_18040 0.60 +0.1
Or see this region's nucleotide sequence