Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17990 and CA264_17995 are separated by 135 nucleotides CA264_17995 and CA264_18000 are separated by 299 nucleotides
CA264_17990: CA264_17990 - nitric oxide dioxygenase, at 4,182,216 to 4,183,427
_17990
CA264_17995: CA264_17995 - 2-hydroxymuconic semialdehyde dehydrogenase, at 4,183,563 to 4,185,008
_17995
CA264_18000: CA264_18000 - short-chain dehydrogenase, at 4,185,308 to 4,186,096
_18000
Position (kb)
4183
4184
4185
4186 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4182.619 kb on - strand, within CA264_17990 at 4182.649 kb on - strand, within CA264_17990 at 4182.678 kb on + strand, within CA264_17990 at 4182.678 kb on + strand, within CA264_17990 at 4182.778 kb on + strand, within CA264_17990 at 4182.808 kb on + strand, within CA264_17990 at 4182.831 kb on + strand, within CA264_17990 at 4182.858 kb on + strand, within CA264_17990 at 4182.858 kb on + strand, within CA264_17990 at 4182.858 kb on + strand, within CA264_17990 at 4182.859 kb on - strand, within CA264_17990 at 4182.862 kb on + strand, within CA264_17990 at 4182.913 kb on + strand, within CA264_17990 at 4182.924 kb on - strand, within CA264_17990 at 4183.045 kb on - strand, within CA264_17990 at 4183.074 kb on + strand, within CA264_17990 at 4183.105 kb on - strand, within CA264_17990 at 4183.138 kb on - strand, within CA264_17990 at 4183.142 kb on + strand, within CA264_17990 at 4183.142 kb on + strand, within CA264_17990 at 4183.148 kb on - strand, within CA264_17990 at 4183.148 kb on - strand, within CA264_17990 at 4183.301 kb on + strand, within CA264_17990 at 4183.302 kb on - strand, within CA264_17990 at 4183.356 kb on - strand at 4183.389 kb on + strand at 4183.390 kb on - strand at 4183.401 kb on - strand at 4183.425 kb on - strand at 4183.434 kb on - strand at 4183.434 kb on - strand at 4183.434 kb on - strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.491 kb on - strand at 4183.528 kb on + strand at 4183.744 kb on - strand, within CA264_17995 at 4183.803 kb on + strand, within CA264_17995 at 4183.880 kb on - strand, within CA264_17995 at 4183.939 kb on - strand, within CA264_17995 at 4183.999 kb on + strand, within CA264_17995 at 4184.202 kb on - strand, within CA264_17995 at 4184.286 kb on - strand, within CA264_17995 at 4184.350 kb on - strand, within CA264_17995 at 4184.354 kb on + strand, within CA264_17995 at 4184.355 kb on - strand, within CA264_17995 at 4184.380 kb on - strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.425 kb on - strand, within CA264_17995 at 4184.425 kb on - strand, within CA264_17995 at 4184.458 kb on + strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.546 kb on - strand, within CA264_17995 at 4184.546 kb on - strand, within CA264_17995 at 4184.547 kb on + strand, within CA264_17995 at 4184.548 kb on - strand, within CA264_17995 at 4184.603 kb on + strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.632 kb on + strand, within CA264_17995 at 4184.659 kb on - strand, within CA264_17995 at 4184.684 kb on + strand, within CA264_17995 at 4184.706 kb on + strand, within CA264_17995 at 4184.732 kb on + strand, within CA264_17995 at 4184.742 kb on + strand, within CA264_17995 at 4184.742 kb on + strand, within CA264_17995 at 4184.743 kb on - strand, within CA264_17995 at 4184.794 kb on - strand, within CA264_17995 at 4184.794 kb on - strand, within CA264_17995 at 4184.906 kb on + strand at 4184.915 kb on - strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.936 kb on + strand at 4184.937 kb on - strand at 4184.938 kb on + strand at 4184.938 kb on + strand at 4184.938 kb on + strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.950 kb on + strand at 4184.974 kb on - strand at 4184.989 kb on + strand at 4185.035 kb on + strand at 4185.043 kb on - strand at 4185.055 kb on + strand at 4185.056 kb on - strand at 4185.059 kb on + strand at 4185.059 kb on + strand at 4185.060 kb on - strand at 4185.060 kb on - strand at 4185.137 kb on + strand at 4185.193 kb on - strand at 4185.218 kb on + strand at 4185.228 kb on + strand at 4185.228 kb on + strand at 4185.243 kb on + strand at 4185.243 kb on + strand at 4185.244 kb on - strand at 4185.247 kb on - strand at 4185.247 kb on - strand at 4185.253 kb on + strand at 4185.336 kb on - strand at 4185.360 kb on + strand at 4185.458 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.511 kb on + strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.552 kb on - strand, within CA264_18000 at 4185.560 kb on - strand, within CA264_18000 at 4185.657 kb on - strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.709 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.835 kb on + strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.848 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.995 kb on - strand, within CA264_18000 at 4186.007 kb on + strand, within CA264_18000
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 4,182,619 - CA264_17990 0.33 -0.8 4,182,649 - CA264_17990 0.36 +0.5 4,182,678 + CA264_17990 0.38 -1.5 4,182,678 + CA264_17990 0.38 -0.7 4,182,778 + CA264_17990 0.46 -0.7 4,182,808 + CA264_17990 0.49 -0.2 4,182,831 + CA264_17990 0.51 -0.7 4,182,858 + CA264_17990 0.53 +0.0 4,182,858 + CA264_17990 0.53 +0.7 4,182,858 + CA264_17990 0.53 -0.5 4,182,859 - CA264_17990 0.53 +0.0 4,182,862 + CA264_17990 0.53 -0.8 4,182,913 + CA264_17990 0.58 -0.3 4,182,924 - CA264_17990 0.58 +1.0 4,183,045 - CA264_17990 0.68 +0.4 4,183,074 + CA264_17990 0.71 +0.0 4,183,105 - CA264_17990 0.73 +2.0 4,183,138 - CA264_17990 0.76 +0.3 4,183,142 + CA264_17990 0.76 -0.2 4,183,142 + CA264_17990 0.76 -0.3 4,183,148 - CA264_17990 0.77 -1.2 4,183,148 - CA264_17990 0.77 -0.2 4,183,301 + CA264_17990 0.90 +0.4 4,183,302 - CA264_17990 0.90 +1.5 4,183,356 - +0.2 4,183,389 + -0.4 4,183,390 - +2.6 4,183,401 - -1.3 4,183,425 - -0.8 4,183,434 - -1.1 4,183,434 - -0.2 4,183,434 - +0.5 4,183,490 + -0.8 4,183,490 + -0.7 4,183,490 + +0.0 4,183,490 + -0.2 4,183,490 + -0.2 4,183,490 + +0.5 4,183,491 - -0.4 4,183,528 + -0.4 4,183,744 - CA264_17995 0.13 -0.7 4,183,803 + CA264_17995 0.17 -0.3 4,183,880 - CA264_17995 0.22 -1.0 4,183,939 - CA264_17995 0.26 -1.6 4,183,999 + CA264_17995 0.30 +0.8 4,184,202 - CA264_17995 0.44 -0.0 4,184,286 - CA264_17995 0.50 +0.3 4,184,350 - CA264_17995 0.54 -0.9 4,184,354 + CA264_17995 0.55 -0.3 4,184,355 - CA264_17995 0.55 -0.8 4,184,380 - CA264_17995 0.57 -1.3 4,184,424 + CA264_17995 0.60 +0.2 4,184,424 + CA264_17995 0.60 -1.7 4,184,424 + CA264_17995 0.60 -0.6 4,184,425 - CA264_17995 0.60 -0.2 4,184,425 - CA264_17995 0.60 +0.3 4,184,458 + CA264_17995 0.62 -0.2 4,184,538 - CA264_17995 0.67 +1.3 4,184,538 - CA264_17995 0.67 -0.5 4,184,538 - CA264_17995 0.67 -1.5 4,184,546 - CA264_17995 0.68 -0.7 4,184,546 - CA264_17995 0.68 -0.3 4,184,547 + CA264_17995 0.68 -1.3 4,184,548 - CA264_17995 0.68 +0.3 4,184,603 + CA264_17995 0.72 -0.5 4,184,604 - CA264_17995 0.72 -0.4 4,184,604 - CA264_17995 0.72 +2.3 4,184,604 - CA264_17995 0.72 -0.1 4,184,605 + CA264_17995 0.72 +0.5 4,184,605 + CA264_17995 0.72 -1.9 4,184,605 + CA264_17995 0.72 -1.6 4,184,632 + CA264_17995 0.74 -0.1 4,184,659 - CA264_17995 0.76 -0.3 4,184,684 + CA264_17995 0.78 -1.0 4,184,706 + CA264_17995 0.79 -0.9 4,184,732 + CA264_17995 0.81 +0.3 4,184,742 + CA264_17995 0.82 -0.1 4,184,742 + CA264_17995 0.82 -0.4 4,184,743 - CA264_17995 0.82 +1.5 4,184,794 - CA264_17995 0.85 +1.5 4,184,794 - CA264_17995 0.85 -0.6 4,184,906 + +2.0 4,184,915 - -0.9 4,184,916 + -0.9 4,184,916 + -0.3 4,184,916 + -2.2 4,184,916 + -1.3 4,184,917 - +0.3 4,184,917 - -1.3 4,184,917 - -0.8 4,184,917 - -1.2 4,184,917 - -0.5 4,184,917 - -0.7 4,184,936 + -1.3 4,184,937 - +0.7 4,184,938 + -0.0 4,184,938 + -0.3 4,184,938 + -0.9 4,184,939 - +0.6 4,184,939 - -1.3 4,184,939 - -1.4 4,184,939 - -1.0 4,184,939 - -0.4 4,184,939 - +1.5 4,184,950 + -0.7 4,184,974 - -0.9 4,184,989 + +2.2 4,185,035 + -0.6 4,185,043 - +0.1 4,185,055 + -0.5 4,185,056 - +1.1 4,185,059 + -0.2 4,185,059 + +0.6 4,185,060 - -0.4 4,185,060 - +1.0 4,185,137 + -0.8 4,185,193 - -0.0 4,185,218 + +0.3 4,185,228 + -0.5 4,185,228 + -1.3 4,185,243 + +0.1 4,185,243 + -1.4 4,185,244 - +1.2 4,185,247 - -0.1 4,185,247 - +0.3 4,185,253 + +0.5 4,185,336 - -2.0 4,185,360 + -1.4 4,185,458 + CA264_18000 0.19 -0.7 4,185,505 + CA264_18000 0.25 +0.5 4,185,505 + CA264_18000 0.25 +0.8 4,185,511 + CA264_18000 0.26 -0.3 4,185,512 - CA264_18000 0.26 -0.4 4,185,512 - CA264_18000 0.26 +0.5 4,185,552 - CA264_18000 0.31 -0.2 4,185,560 - CA264_18000 0.32 +0.3 4,185,657 - CA264_18000 0.44 -0.7 4,185,706 + CA264_18000 0.50 +0.1 4,185,706 + CA264_18000 0.50 +0.2 4,185,708 + CA264_18000 0.51 -1.0 4,185,708 + CA264_18000 0.51 -0.1 4,185,709 - CA264_18000 0.51 -0.8 4,185,792 - CA264_18000 0.61 +1.1 4,185,792 - CA264_18000 0.61 -0.6 4,185,835 + CA264_18000 0.67 -2.9 4,185,836 - CA264_18000 0.67 +1.5 4,185,836 - CA264_18000 0.67 -0.9 4,185,836 - CA264_18000 0.67 -1.6 4,185,836 - CA264_18000 0.67 +0.8 4,185,848 + CA264_18000 0.68 +0.4 4,185,915 + CA264_18000 0.77 -1.3 4,185,915 + CA264_18000 0.77 -0.0 4,185,995 - CA264_18000 0.87 -1.6 4,186,007 + CA264_18000 0.89 -1.0
Or see this region's nucleotide sequence